Protein

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Genbank accession
AUR83924.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFLSAPRINPLKVATPLAVGGIAQLPNPAPKQWLRMDTIIPAHFGCIVITVGRHYSSAPAENGFFIERVSDGYRLYEINPFAAANTYDEASYTIQRPLEGWAGYNFLSNTSGAGTINITAVPQALDLYS
Physico‐chemical
properties
protein length:129 AA
molecular weight: 14032,79160 Da
isoelectric point:6,03951
aromaticity:0,11628
hydropathy:0,04186

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.044.O._10N.261.51.B8
[NCBI] 		1881303 Viruses > Varidnaviria > Abadenavirae > Produgelaviricota > Belvinaviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83924.1 [NCBI]
Genbank nucleotide accession
MG592427.1 [NCBI]
CDS location
range 9524 -> 9913
strand +
CDS
ATGTTTTTATCAGCTCCAAGAATCAATCCATTAAAAGTCGCTACCCCGTTAGCAGTGGGAGGAATCGCACAATTACCCAATCCCGCACCTAAGCAGTGGTTGAGAATGGACACTATTATACCTGCCCATTTCGGGTGTATAGTAATTACGGTTGGGAGACATTACTCGTCTGCGCCCGCCGAAAATGGGTTTTTTATAGAGCGAGTTTCTGATGGGTATCGCCTGTACGAAATTAACCCTTTCGCTGCCGCTAATACATATGACGAGGCAAGTTATACAATCCAAAGACCACTAGAGGGATGGGCGGGCTATAATTTTCTCAGCAATACAAGCGGCGCGGGCACAATAAATATCACTGCCGTACCCCAAGCGTTAGACCTATATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f640fb33ba6b4c9d39367bd44de4c8c5b2356d12c03572c99d782540d239ef1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7257
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank