Protein

Genbank accession
AGI61817.1 [GenBank]
Protein name
putative phage minor structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MKKVTSSRAYDCLVQKYIGSAYDKVKDVSDNLEKVSSVADNLTQVNLLIPELDNIKACAENIDEIKNAPIAAENANNSAILANDVLEQIKDIVSDLEAVPLGNGSWQAGQTFTAYNQFMVYNGIAYKPLTTTTLPYEPTGATPDLAFVGPFDANDHSKLNNRDEAGAHPASAIDGAMWHVGTVKDLQGLVGVGGIQVSVASYHDLDYLSGGGTFVWGTGRHNGGTFIDPNRPFPTDWNDQGQLKTWFAESSSDVGGWSRTYENDINVSYFGYLKDSNNNETFKAVANHVELSKERVSGYEKDTTFVVSTSQISTIQKAANLFPRYLDFKFSIEIEPGDYSAEDVKVPSTSRATNQNLHEPCSATIKSATGNPDDVLVGSIFFVNAGGSNTQDITIDHTTPLYSGESGGLAYWFCSGEVSCSNIKYSAGFVGAGILAYGSKVEARTIDVTNLDVLVRAKRGAEVHIRFCTGDFTGDRVIVSYEGSGVVSGNHTFTKSSGVWADVDGTSTVINRDTGEYSYSVYSQIPLLRDNNLLLKRTTNFGSTETLLDGVKPLNTDSVFTQLGDYCFVSGSNGKNLTLDRNNYQSADNHRRYKSDGTASGLSLSADGNIYFHFYAAGTEDDVVTRASAKSIFMNAGGLRNDSDNVPWINGSSSGKFVLTPSGTFGASSDSNAIQLLNRTGTDGAVTSFYKNGSAVGGISVSSNATAYNTSSDYRLKTNIRECDNALSIVKNLNPVTFDWIRDGSTTTGFLAHELAEQIPEAVTGTKDELNQDGEPVYQAVDHSKIVPYLTKVIQDLMDRVEQLERIK
Physico‐chemical
properties
protein length:808 AA
molecular weight: 87348,25090 Da
isoelectric point:4,83662
aromaticity:0,09282
hydropathy:-0,34097

Domains

Domains [InterPro]
IPR030392
712–764
IPR030392
IPR030392
712–808
IPR030392
AGI61817.1
1 808
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JA-1
[NCBI] 		1283071 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGI61817.1 [NCBI]
Genbank nucleotide accession
KC438282 [NCBI]
CDS location
range 57351 -> 59777
strand -
CDS
ATGAAAAAAGTAACTAGCAGTAGGGCTTATGATTGCTTAGTTCAGAAATATATTGGGTCAGCTTACGATAAAGTTAAAGACGTGTCTGACAACTTAGAAAAAGTGTCTTCCGTAGCTGATAACTTAACTCAGGTAAATTTACTTATACCAGAATTAGATAATATTAAAGCATGTGCAGAAAATATAGATGAAATTAAAAATGCCCCTATTGCGGCGGAGAATGCAAATAATAGTGCGATTTTAGCTAATGATGTTTTAGAACAAATTAAAGATATTGTGAGTGATTTAGAAGCAGTTCCACTTGGGAATGGTTCTTGGCAAGCTGGACAGACGTTCACCGCGTACAATCAGTTTATGGTGTATAACGGCATAGCGTACAAACCCCTAACGACCACGACGTTGCCCTACGAACCTACTGGAGCTACGCCCGATTTAGCCTTTGTTGGGCCGTTTGATGCAAACGACCACTCGAAGTTGAATAATCGTGATGAGGCAGGGGCACATCCTGCTAGTGCTATTGATGGAGCAATGTGGCACGTTGGTACGGTTAAGGACTTGCAAGGATTAGTAGGTGTGGGAGGTATTCAGGTTAGTGTTGCTTCTTACCACGATCTTGATTACTTATCGGGTGGGGGTACGTTTGTATGGGGTACTGGTCGTCACAATGGTGGAACTTTTATTGACCCCAACAGACCTTTTCCGACTGATTGGAATGATCAAGGTCAGCTTAAGACTTGGTTTGCTGAATCGAGTAGTGACGTGGGCGGGTGGAGTCGTACCTATGAAAATGATATTAACGTAAGTTATTTCGGATATTTAAAAGACTCCAACAACAATGAAACTTTTAAAGCAGTGGCTAATCATGTGGAACTAAGCAAAGAGCGCGTAAGCGGTTATGAAAAAGACACGACTTTCGTTGTGTCTACATCGCAGATTTCCACGATACAAAAAGCAGCAAATCTATTTCCACGTTACCTTGATTTCAAATTTTCGATTGAAATTGAACCGGGGGACTACTCGGCTGAAGATGTTAAAGTGCCATCAACTAGCAGAGCAACTAACCAAAATTTACATGAACCATGCAGCGCAACAATAAAAAGTGCAACAGGAAATCCCGATGATGTATTGGTAGGGTCTATTTTCTTTGTAAACGCTGGGGGTTCAAACACCCAAGATATTACGATAGATCATACCACCCCGCTGTACAGCGGTGAATCTGGTGGTTTGGCATACTGGTTTTGTAGTGGGGAAGTCAGTTGCAGTAACATTAAATACAGCGCTGGATTTGTTGGCGCCGGGATCTTGGCATACGGATCTAAAGTTGAAGCACGAACTATAGATGTAACAAACTTAGACGTTTTGGTGAGAGCAAAGCGTGGTGCAGAGGTTCATATTAGATTTTGCACTGGCGATTTCACTGGTGATCGAGTCATTGTGTCATACGAAGGTTCTGGTGTAGTTTCAGGAAATCATACTTTTACTAAGTCCAGTGGTGTATGGGCCGATGTTGACGGAACATCAACAGTAATAAACAGAGATACAGGAGAGTATTCTTACTCTGTTTATAGCCAAATTCCTTTACTCAGAGACAATAACCTACTGCTGAAGCGAACTACTAATTTTGGTAGCACAGAAACTTTATTGGATGGAGTTAAACCCCTCAATACCGACTCCGTGTTCACACAGTTGGGTGATTATTGTTTTGTATCGGGTAGTAACGGCAAGAATTTGACACTGGACAGGAATAACTATCAGTCTGCTGATAACCATCGTCGGTATAAATCTGACGGCACGGCTAGTGGTCTAAGTTTAAGTGCAGATGGTAACATTTACTTTCATTTTTACGCCGCTGGGACGGAAGATGACGTTGTAACTCGAGCGTCTGCCAAGTCTATCTTTATGAATGCAGGGGGGTTAAGGAATGATTCAGACAATGTACCTTGGATCAACGGATCAAGCTCTGGGAAGTTTGTTTTAACTCCATCTGGAACTTTTGGGGCATCATCTGACAGCAACGCAATTCAATTACTAAACAGAACAGGAACTGACGGCGCAGTTACGTCTTTTTATAAAAATGGGTCGGCGGTAGGTGGTATCTCGGTTTCCTCTAATGCAACAGCATACAATACAAGTTCTGACTATAGACTAAAAACAAACATTCGAGAGTGCGATAATGCGTTAAGCATTGTAAAAAATCTTAACCCTGTTACTTTTGATTGGATTAGAGACGGGTCTACTACAACAGGGTTTTTAGCGCACGAATTGGCTGAGCAAATTCCAGAGGCGGTAACAGGAACTAAAGATGAGCTAAATCAAGATGGAGAGCCTGTTTATCAAGCTGTAGATCACTCTAAAATCGTACCTTATTTAACTAAGGTTATACAGGATTTGATGGACAGAGTGGAGCAGTTAGAAAGGATTAAATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f7fc829a6f758d6320e3ef5fa093e3d3bb599e660bd56cccf80c5c5f5d73cc48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6264
Evidence 0,6264
Download PDB

Literature

Title Authors Date PMID Source
Whole genome sequencing and comparative genomic analyses of two Vibrio cholerae O139 Bengal-specific Podoviruses to other N4-like phages reveal extensive genetic diversity Fouts,D.E., Klumpp,J., Bishop-Lilly,K.A., Rajavel,M., Willner,K.M., Butani,A., Henry,M., Biswas,B., Li,M., Albert,M.J., Loessner,M.J., Calendar,R. and Sozhamannan,S. 2013 23714204 GenBank