Protein

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Genbank accession
XLL20875.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANVTDKSILTAAGKALLAQLNAEEKPLVIDKMIFANVPNRPEYPQPDDVVPSNNVVHEAAVEQRGRLSVDSVIYSTTLTSQEGPFEFNWTGAYCSEYGVLVTIDHHALTPKTADEPGVAGNTLVRSVVLEYKDIAEITNITVDASTWQYNATPRMKKMDDDVAQANIDQNGKDWFIEDGFLVTPQASAFNIKAGAGYVSGNRVSLEFDRNVQVPNKPSFIYVDAHREGTPTGEQITLFDFMVTAEEKDDYTDANDVKHFVCKVAKVLANGSVSDLRPEGVQATKGYVSDIAGKHESQVVEGDVYPTSPHQSIKVGDKIPARTSLVRVDGKIVSLNKTILSEAIVTAIHGTLVNVGESPYKYRPKLYGTLDLKEIDERVYDDGVDAAPIFLEALKRADYGMQIIFSGESCQFDSAINFNLADVTGRVDIDFRRCNIRIPADFPDTTVFNLGFLSDYRFFIDSGFDNLHITFDDAAEVIDVFDCEKIARITFKDYEINNLKGTVFSKTSVGHEITGENLYVRSADVENDTGIYINFTDSYFTNLKPIGFSEFGIVNAGPDNRYYGCHPWSFPRSNPQYSHMTTKILIYDKEDGMWTDCYADTFERKDSVQPPSFSNGGIGYFFDKVSGIARMSNCGFYALDTSKDSLIGIAAKSTVQQINVSGGYMAGSNPDAYLKFVHTETTGTAVNLWGCNFSEEQYQAKEQVIGSALVSKTETYIKTLDPNQFNTFNSALKTWKPRRNDYAALTFKDDGESTDMYYWDINSNQLEQVLKRSQSVVVINSLSTLGITNANAPTTKPEFFKAIVDAVELRGLIPCKFMVRMASNTYGDITANIFPYPCVFEGSLVDENTFVITAQKFAAAGVSHAAYERYSNTFHEWN
Physico‐chemical
properties
protein length:878 AA
molecular weight: 97466,86110 Da
isoelectric point:4,82986
aromaticity:0,11048
hydropathy:-0,28280

Domains

Domains [InterPro]
DC_1466
ATT
1–200
DC_1466 DC_2319 DC_1602
IPR022225
ATT
8–147
IPR022225
XLL20875.1
1 878
Architecture
ATT
STR
STR
ATT 1-200 | STR 242-375 | STR 462-720 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL20875.1
1 878
Domain Start End Length (AA) Confidence
N-terminal 1 385 385 0,9946
Central domain 386 694 310 0,9896
C-terminal 695 878 183 0,8952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-385
Central
386-694
C-terminal
695-878

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 10N.286.54.F9_PE001
[NCBI] 		3385338 No lineage information
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL20875.1 [NCBI]
Genbank nucleotide accession
PQ189358.1 [NCBI]
CDS location
range 27899 -> 30535
strand +
CDS
ATGGCAAACGTAACAGATAAGTCTATTTTAACCGCCGCAGGTAAGGCGCTATTGGCACAGCTTAACGCAGAAGAAAAGCCGCTTGTGATCGACAAGATGATTTTCGCTAATGTACCGAACCGCCCAGAATACCCACAGCCTGATGATGTGGTACCTAGCAATAATGTCGTCCATGAAGCAGCAGTAGAGCAGCGCGGTCGCCTGTCGGTGGATTCGGTGATTTACAGCACGACGCTAACCAGCCAAGAAGGACCTTTTGAGTTTAACTGGACAGGGGCGTATTGCTCTGAATATGGCGTATTAGTCACAATCGACCACCATGCACTGACACCTAAGACCGCCGACGAACCCGGTGTTGCAGGTAATACTTTGGTGCGTTCGGTGGTGCTTGAGTACAAAGACATTGCGGAAATCACCAATATCACGGTGGATGCCTCAACGTGGCAGTACAACGCAACACCACGCATGAAGAAAATGGACGACGATGTAGCACAAGCCAACATCGACCAGAACGGTAAAGATTGGTTTATCGAAGATGGTTTCTTGGTTACACCCCAAGCGAGTGCATTCAACATTAAAGCGGGTGCCGGCTATGTGTCGGGCAACCGTGTCTCGCTTGAATTTGATCGCAACGTTCAAGTGCCTAATAAGCCATCGTTTATCTACGTAGACGCGCACCGCGAAGGCACACCAACAGGCGAACAAATCACCCTGTTTGATTTCATGGTCACAGCAGAAGAGAAAGACGACTACACAGATGCAAATGACGTGAAGCACTTTGTTTGCAAGGTTGCTAAGGTGTTGGCTAATGGTTCTGTCAGTGATTTGAGGCCTGAAGGGGTTCAAGCAACTAAAGGTTATGTTAGCGATATAGCAGGGAAGCATGAGTCACAGGTTGTTGAAGGGGATGTTTACCCAACATCACCGCATCAATCAATCAAGGTTGGTGATAAGATTCCGGCCAGAACTAGCCTAGTAAGGGTAGATGGTAAAATAGTATCTCTTAATAAAACCATTCTATCTGAAGCTATTGTTACAGCAATTCATGGAACCTTAGTTAACGTTGGAGAAAGTCCTTATAAGTACCGACCAAAGCTTTATGGAACGCTTGATCTTAAAGAGATAGATGAGCGTGTTTATGATGATGGTGTAGACGCCGCGCCAATTTTTCTTGAAGCACTTAAACGTGCTGATTATGGTATGCAAATCATCTTTAGTGGTGAGTCATGTCAATTTGATAGTGCTATAAACTTCAATTTAGCGGATGTTACAGGTCGAGTCGATATCGATTTTAGACGCTGTAATATCCGCATCCCCGCTGATTTTCCCGACACTACAGTTTTCAACCTTGGTTTCTTGAGTGACTATCGATTCTTCATTGATAGTGGCTTTGATAATTTGCATATCACATTTGATGATGCAGCAGAGGTTATTGATGTCTTTGATTGTGAAAAAATTGCTCGCATCACTTTTAAAGATTATGAGATTAACAATCTTAAAGGGACTGTATTCTCAAAAACATCGGTTGGTCACGAAATAACAGGCGAGAATTTATATGTACGCAGTGCTGATGTTGAAAATGACACCGGAATTTATATAAATTTCACTGATAGTTATTTTACCAACCTAAAGCCAATTGGTTTTAGTGAATTTGGTATCGTCAATGCTGGACCTGATAACCGCTACTATGGCTGTCATCCCTGGTCTTTCCCTAGGTCTAATCCGCAATATTCACACATGACGACTAAAATCCTCATTTACGATAAAGAGGATGGTATGTGGACAGACTGTTATGCCGATACATTTGAACGCAAAGATTCTGTACAGCCACCGTCATTTTCAAACGGCGGTATCGGCTATTTCTTTGATAAGGTTTCAGGTATTGCGAGAATGTCAAACTGTGGCTTCTATGCGTTAGATACATCAAAAGATTCTTTAATCGGTATTGCCGCTAAGTCGACGGTACAGCAGATTAATGTGTCAGGTGGGTATATGGCAGGTTCAAATCCTGATGCCTATTTGAAATTTGTTCACACAGAAACTACAGGAACGGCAGTTAACTTATGGGGATGTAACTTTAGCGAGGAACAATATCAAGCAAAAGAGCAAGTCATTGGTTCTGCTCTAGTGAGTAAAACCGAAACTTACATCAAAACGCTAGACCCTAATCAATTCAATACATTCAATAGCGCCTTGAAAACATGGAAGCCAAGACGTAATGATTATGCCGCCTTGACATTTAAAGATGATGGCGAATCCACGGATATGTATTACTGGGATATTAACAGCAATCAATTAGAGCAGGTGTTGAAGCGCAGCCAGTCTGTAGTGGTGATTAATTCGCTGTCCACACTGGGTATTACCAATGCTAATGCGCCAACGACTAAGCCAGAGTTTTTTAAGGCGATAGTTGATGCGGTGGAGTTGAGGGGTTTGATTCCGTGTAAGTTTATGGTGCGAATGGCATCAAATACTTATGGAGATATTACAGCGAACATCTTCCCCTATCCTTGTGTTTTCGAAGGCTCACTTGTTGATGAAAATACCTTTGTTATAACCGCGCAAAAATTTGCAGCAGCAGGAGTGAGTCATGCAGCTTATGAACGATATAGCAACACCTTCCATGAGTGGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dce469a60619d971cab3ac9a98872ff3be43d1072348f36070010ed09081873b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50