Protein

View in Explore
Genbank accession
YP_009845085.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MQLEFSMMLTLATMALITLRPQLAFQIIDAFKPEADEKPERKAWEDLLMFKKGSSSAPSPDPRIGEAALKQAELGQQSLDFWKDQMGIANERQKGQDAIANQVTQQQLDASKQAQQWATEDRNRWNTVFKPMQDEFIDTAKNWDSEERQNKLAAEASADVLSNAAQQRDATNRQQAAMGVDPRSGRYQGVDRAAELATGLNVAGAQNNARNTVRKEGVAMKADAINMGSGLAVNPATSLGLGVSSGSAAMGTTSANNAQAAGHAGMMQNGFNSAMQGQAGMASALNNQYSNQLNAWSAQQQANANSTSSLFGGLGSIAGMGLMAFSSKDYKEDKKPIEGGLDAVNSMPVEEWKYKDGIADGGEHIGPYAEDFQKATGKGNGKMIPVMDAVGVTMKAVQELDKKVEALGRSVKRPARAA
Physico‐chemical
properties
protein length:418 AA
molecular weight: 44729,57650 Da
isoelectric point:5,53307
aromaticity:0,05502
hydropathy:-0,55478

Domains

Domains [InterPro]
DC_1380
STR
40–413
DC_1380
IPR030392
CHP
326–375
IPR030392
YP_009845085.1
1 418
Architecture
STR
STR 40-413 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Parlo
[NCBI] 		2557554 Uroviricota > Caudoviricetes > Parlovirus >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009845085.1 [NCBI]
Genbank nucleotide accession
NC_048758 [NCBI]
CDS location
range 46580 -> 47836
strand +
CDS
ATGCAACTGGAATTTTCCATGATGCTGACGCTGGCAACGATGGCGCTGATCACCCTGCGCCCTCAGCTGGCCTTCCAAATCATCGACGCATTTAAGCCGGAGGCCGACGAAAAGCCGGAGCGTAAGGCATGGGAAGATCTGCTGATGTTCAAGAAAGGCAGCTCTTCGGCACCGTCGCCGGATCCACGCATCGGCGAGGCAGCGCTTAAGCAGGCTGAGCTGGGACAGCAGTCGCTGGACTTCTGGAAAGATCAGATGGGCATCGCCAACGAGCGCCAGAAGGGGCAGGACGCGATCGCCAACCAGGTTACCCAGCAGCAGCTGGACGCATCGAAGCAGGCGCAGCAGTGGGCAACGGAAGACCGCAACCGCTGGAATACCGTTTTCAAGCCGATGCAAGACGAATTCATCGACACGGCGAAAAACTGGGATAGCGAAGAGCGCCAGAACAAGCTGGCGGCCGAGGCCAGCGCCGACGTACTGAGCAACGCCGCTCAGCAGCGTGACGCGACCAACCGGCAGCAGGCCGCGATGGGCGTTGACCCGCGCAGCGGCCGCTATCAGGGAGTTGACCGTGCTGCCGAGCTCGCTACCGGGCTGAATGTCGCTGGCGCGCAGAACAATGCCCGTAACACCGTCCGTAAAGAAGGCGTCGCCATGAAGGCTGATGCTATCAATATGGGAAGCGGTCTGGCAGTAAACCCGGCCACGTCGCTGGGGCTTGGCGTGTCATCTGGCAGCGCCGCCATGGGTACCACCTCCGCCAACAATGCGCAGGCCGCCGGGCACGCTGGCATGATGCAGAACGGCTTCAATTCTGCGATGCAAGGCCAGGCTGGCATGGCGAGCGCGCTGAATAACCAGTATTCCAACCAGCTCAATGCGTGGTCGGCACAGCAGCAGGCTAACGCCAACTCCACCAGCAGCCTGTTCGGCGGCCTTGGCTCGATCGCTGGTATGGGCCTGATGGCCTTCTCGTCCAAAGACTACAAAGAGGACAAAAAACCGATCGAGGGCGGTCTGGATGCCGTTAATTCGATGCCGGTGGAAGAGTGGAAATACAAGGACGGCATTGCCGACGGTGGCGAGCACATCGGCCCGTATGCCGAAGACTTCCAGAAGGCTACCGGCAAGGGCAATGGCAAAATGATCCCCGTCATGGATGCCGTGGGCGTCACCATGAAGGCCGTGCAGGAGCTGGATAAGAAAGTCGAAGCTCTTGGCCGTAGCGTTAAACGACCAGCGAGGGCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
029afd4a72e23b98d0b248e42d1592a74989b30aaec5c70c5d1a2e24e398434e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7926
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50