Protein

View in Explore
Genbank accession
WZL04374.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MVNFIGNAISLSDVQTSKVNLQVNRFLQATGETDVVNHAGTAQIFITDNKNWGAYDKELKRHIPLPISQGGTGAVTIGDAKTNLQIPSVGAGDWLEIAAPSGVEAGKYYPIVIKAQYASLYASGFFIDIQTRSSRGSDPMNCCTFNGFIRTGGWSDRKDAGYGYYNRYGSNELALKCILVSAKNAEDNIAVYVEGRAFPVKMRIPQFCTATAVASASTYGEVTFAWGTSNPATDSVGVNTLFDFSLNRVGFYQASTEGNYYIGNGQRIVLSNGMSVGDELTLTTPKITFSGTVAAGNGFIADGTSVSNATFYSRYRVGDTVYGAEFRASENAAQVIVGDPAGTNHQFFNFNLNGTFSAPNGLLSSTGVDWTLRRDATDSTTMFPHQKVSWLNAGCEPMGDGRVHYCWIMGVIPPTPGTIERPVNVMYVGFHQFKITIAPNSISQSDLDRMHVYVSDGTDFAGDFINKFLGMQPEQPVEAREHISPWPPMIDQEVLQPKTAQTAPQKPEQKVKPNDEE
Physico‐chemical
properties
protein length:517 AA
molecular weight: 56164,17650 Da
isoelectric point:5,38160
aromaticity:0,10638
hydropathy:-0,24681

Domains

Domains [InterPro]
DC_1205
STR
3–224
DC_1205
WZL04374.1
1 517
Architecture
STR
STR 3-224 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZL04374.1
1 517
Domain Start End Length (AA) Confidence
N-terminal 1 416 416 0,0826
Central domain 417 506 91 0,1393
C-terminal 507 517 10 0,8789
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-416
Central
417-506
C-terminal
507-517

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KS_W4
[NCBI] 		3140158 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZL04374.1 [NCBI]
Genbank nucleotide accession
PP627281.1 [NCBI]
CDS location
range 19780 -> 21333
strand +
CDS
ATGGTAAATTTCATTGGTAACGCTATAAGTCTATCAGATGTACAAACGTCCAAAGTAAACCTACAGGTAAATAGATTCCTGCAAGCTACAGGCGAAACTGATGTGGTTAACCATGCAGGGACAGCTCAAATTTTTATCACTGATAATAAAAATTGGGGGGCTTACGATAAAGAATTAAAGCGTCATATCCCTTTGCCCATTTCACAGGGTGGGACTGGAGCGGTTACTATTGGTGACGCTAAGACAAATTTACAAATACCTTCTGTTGGTGCTGGAGACTGGTTGGAGATTGCTGCTCCTTCTGGCGTTGAAGCGGGGAAATATTATCCAATTGTAATCAAAGCTCAATATGCCTCTTTATATGCTTCTGGTTTCTTTATAGATATACAAACTAGAAGCTCTAGAGGTTCAGATCCTATGAACTGTTGTACATTTAACGGATTCATACGAACAGGTGGTTGGTCGGATAGGAAAGACGCTGGCTATGGATACTATAACCGATATGGTTCTAATGAGCTTGCTTTAAAATGCATATTGGTATCCGCTAAGAATGCTGAAGACAATATAGCTGTATATGTAGAAGGTAGAGCATTCCCAGTGAAAATGCGCATACCTCAATTTTGCACAGCTACGGCAGTCGCTTCAGCTTCTACATATGGTGAAGTGACATTTGCTTGGGGTACATCCAATCCTGCTACAGATTCAGTTGGGGTAAATACCCTATTTGATTTCTCTTTAAATAGAGTTGGTTTTTATCAAGCATCTACTGAAGGAAACTATTATATTGGTAACGGCCAACGTATAGTTCTTTCTAATGGGATGTCCGTAGGGGATGAATTAACCTTAACCACACCTAAGATTACTTTCAGTGGCACAGTAGCAGCGGGTAACGGTTTTATTGCGGATGGGACGTCTGTATCCAATGCTACTTTTTATAGTCGTTATCGTGTCGGTGATACTGTTTACGGTGCGGAGTTCCGGGCTAGTGAGAATGCAGCCCAAGTTATTGTCGGAGACCCAGCAGGAACTAATCATCAATTCTTCAACTTTAATCTTAATGGTACATTTAGCGCGCCAAACGGTTTATTAAGCTCCACTGGTGTTGATTGGACGTTACGTCGGGACGCTACCGATTCAACTACCATGTTCCCACACCAGAAGGTTAGCTGGCTTAATGCTGGCTGTGAACCTATGGGCGATGGAAGGGTTCATTACTGTTGGATTATGGGAGTGATACCGCCTACGCCTGGCACTATCGAACGACCCGTGAATGTGATGTATGTCGGCTTCCACCAGTTTAAAATCACGATCGCTCCAAACTCCATTAGTCAGTCTGATCTTGATCGTATGCACGTTTACGTCAGCGATGGTACAGACTTTGCAGGTGATTTTATTAATAAGTTTCTTGGTATGCAACCTGAGCAACCTGTAGAAGCTCGCGAGCACATTAGCCCGTGGCCGCCAATGATTGATCAGGAAGTGTTACAGCCAAAGACCGCTCAAACGGCCCCTCAGAAACCGGAGCAGAAGGTGAAACCAAATGACGAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2694e2936afcb96dfc70bc03808dac438f3cd704ef96d9490fec9d57d2445b18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4834
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage library of National Institute of Infectious Diseases Japan Azam,A.H., Ojima,S. and Kiga,K. 2014-07-25 — GenBank