Protein

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Genbank accession
QQO88250.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,89
Protein sequence
MPVVWHCGFNGFINNASGQGQSNLFINTNDNVAGGHALSTDNLINNVFGRGNGNQNGGLLPLITYYGCKWTANGSYGSSYVFGRVKPSFFDNSVPCLSTEQYQPASTSDWWGGWQFRIDLCWPSAERLTTSWRMGFRIGRATHPTYNIGYQVYICPAGINGAEGRDLYRIPITAGQDEKYMEVEWLADTKTLNIYLNDEIVSTRTNYTAYDMSYGLILVCEHFVSNNTSSTPFFGFELRDMYVQKIVSDADQRLGSSTKVYAFNPVNDDVVQFSRPDAYSSNAAVAATPIAPGGITPTPSQSTAILGADVVGQQDLYNIDISKVSTRLASIEAVNVRTMARNPLLGNRQSAAIAKSGAVQTQSENTSTLEQGGLWRFNTLQMVSDPADGSRWNLTKLAGLKVGTKFVA
Physico‐chemical
properties
protein length:408 AA
molecular weight: 44640,32830 Da
isoelectric point:5,85404
aromaticity:0,11029
hydropathy:-0,25686

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO88250.1
1 408
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,0027
Central domain 197 395 200 0,1367
C-terminal 396 408 12 0,9981
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-395
C-terminal
396-408

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_ER3
[NCBI] 		2801571 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO88250.1 [NCBI]
Genbank nucleotide accession
MW355467 [NCBI]
CDS location
range 49069 -> 50295
strand +
CDS
ATGCCTGTAGTATGGCACTGCGGTTTTAATGGTTTTATCAACAATGCGTCGGGGCAGGGTCAGTCTAACCTGTTTATCAACACAAACGATAACGTGGCGGGAGGCCATGCCCTCTCCACCGACAATTTAATTAATAACGTTTTTGGTCGTGGAAACGGCAACCAAAACGGCGGCCTTCTCCCTTTGATCACTTACTACGGATGTAAATGGACGGCAAACGGGTCGTACGGGTCGTCTTATGTTTTTGGTCGTGTTAAGCCGTCTTTCTTTGATAACTCCGTGCCATGCCTAAGCACCGAACAATACCAACCTGCTAGCACTTCCGACTGGTGGGGAGGGTGGCAGTTCCGTATCGATTTGTGCTGGCCCTCGGCGGAGCGCCTGACGACGTCGTGGCGCATGGGCTTCCGTATTGGCCGCGCAACACACCCCACATACAATATTGGTTATCAAGTCTATATCTGCCCGGCAGGTATTAACGGCGCAGAAGGCCGAGACTTATATCGTATCCCGATCACTGCGGGTCAGGACGAGAAGTATATGGAGGTGGAATGGTTGGCGGATACCAAGACCCTTAACATCTATCTGAACGACGAAATTGTCTCGACCCGCACCAACTACACCGCCTACGATATGTCGTACGGCCTTATTTTGGTGTGCGAACATTTCGTTAGCAATAACACTAGCTCCACACCGTTCTTCGGTTTTGAACTGCGGGACATGTATGTCCAGAAAATCGTTTCAGATGCAGATCAACGCCTCGGGTCTTCGACGAAAGTATATGCGTTCAATCCCGTTAATGACGATGTTGTACAGTTCTCTCGGCCAGACGCATATTCGTCAAACGCCGCCGTCGCGGCAACGCCGATCGCTCCCGGTGGTATCACCCCGACGCCGTCGCAATCTACTGCAATTCTCGGGGCGGACGTGGTCGGACAGCAAGACCTGTATAACATTGACATTTCCAAAGTCAGCACACGTCTGGCGTCGATTGAAGCGGTTAACGTCCGGACGATGGCCCGAAATCCGTTGCTTGGAAATAGACAATCTGCCGCGATCGCCAAGTCCGGGGCGGTTCAAACCCAAAGCGAGAACACATCGACGCTCGAACAAGGCGGCCTGTGGCGTTTCAACACGTTGCAGATGGTGTCTGACCCGGCGGATGGCTCGCGCTGGAACCTTACAAAACTGGCCGGGCTTAAAGTCGGTACCAAATTCGTCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
da5be42e74a4086ee705b525e7d6bce19aaf3e16a0d12568e8c1b721d2a9f146
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5820
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi Rodwell,E.V., Wenner,N., Pulford,C.V., Cai,Y., Bowers-Barnard,A., Beckett,A., Rigby,J., Picton,D., Blower,T.R., Feasey,N.A., Hinton,J.C.D. and Perez-Sepulveda,B. — — GenBank