Protein

Genbank accession
YP_009222180.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTFPATNSREATELIIDSGNQLHEIVNEDATTEVLTESGYIPSVRKALADTFLFQDPIPWQQGSDETAFNQLRTFDGDIYWAPTATTLNPIPMGATPVGDSNWGLAPVNPRGYKGLWPDTGGSAEKGETYQTQVGGTPTGEYYTALKNTSVDPIGDNVNWKANNDYGAVVGDGLVVKHRRGTQSEIDNFTPAIAEIVVNTTEKELVLGDGATPGGFPTSKKQNTMLSYGNLAQALSDTSLRKGYTLNTVERVSGSGGDGINWDVVLTSSVTPNGFDIVQCTGVPSLSLKMRNESNRFSSFGVIKESSDLSVFCRDVALGNYDANYLDYGTYNYSGNLFLADGQMLSGKGSGNTISSNKGTRLKPTNANAKIRLFPHAKLSDVFIDGEYSESNKAVDGIYIKPHDSGDTDYVSGDPTTLSCIWTKVSNVNIQKFSNNISIEGESFNLWFENLVSVAGRFKQVGGGETTLTACNLSDTTDQEIVFNDGGKISVHGGAIQNTNGGHPCIINQGKMLIQGTYMENARAGANNNGYLIDNYGSLTLVQPKSMAIADKAIRGRYGSKTYLRDVEFTGNNANTNEVFNGRGDNNNEGGGFLYFENLTFRSCLPASINYIEHAIGGYSDKGYSIESGNEKTLYLNEGANLTDLTSSGGTLTANNTAEYLTNGGSLRFVAAASVPSVTLTKTLRGLSGHLVMVRWAVLAKPSASDNTRFLANIGGDVTCAYVNVEFDADSANGNTDKWYYITTSAVLDPQLTEHTITCNLFTSLGGSGASNGTSHIDRIELVDCGLVHKV
Physico‐chemical
properties
protein length:792 AA
molecular weight: 84893,80630 Da
isoelectric point:4,86197
aromaticity:0,08712
hydropathy:-0,34205

Domains

Domains [InterPro]
IPR058969
8–106
IPR058969 G3DSA:2.10.10.30
IPR041352
177–213
IPR041352
YP_009222180.1
1 792
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage qdvp001
[NCBI] 		1003177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009222180.1 [NCBI]
Genbank nucleotide accession
NC_029057.1 [NCBI]
CDS location
range 98011 -> 100389
strand +
CDS
ATGAGTACTTTTCCAGCAACAAACAGTAGAGAAGCTACAGAGCTTATAATCGATAGTGGTAATCAGTTACATGAAATTGTTAACGAAGATGCCACAACTGAAGTACTAACAGAAAGTGGTTATATACCAAGTGTAAGGAAAGCCCTTGCAGATACTTTTTTGTTTCAAGACCCTATTCCTTGGCAGCAAGGTTCAGACGAGACTGCATTTAATCAGCTTAGAACTTTCGATGGTGATATTTATTGGGCACCTACCGCTACAACTTTAAACCCAATCCCAATGGGAGCCACCCCTGTTGGAGATAGTAATTGGGGTTTAGCTCCTGTTAATCCTAGAGGTTACAAAGGCTTATGGCCTGACACTGGCGGCAGTGCAGAAAAAGGTGAAACGTACCAAACTCAAGTTGGTGGAACACCAACAGGCGAATACTATACAGCACTGAAAAATACATCGGTTGACCCTATTGGTGATAATGTTAATTGGAAGGCAAACAATGATTACGGGGCTGTTGTTGGCGATGGTTTAGTCGTAAAACACAGACGTGGCACGCAGTCTGAAATCGACAACTTTACACCAGCAATCGCTGAGATTGTTGTCAACACTACTGAAAAAGAACTGGTGCTTGGGGACGGCGCTACACCCGGTGGATTCCCTACCTCTAAAAAACAAAACACAATGTTGTCTTACGGTAACTTAGCACAAGCACTATCCGACACCAGTTTGAGGAAAGGTTACACGCTAAACACCGTGGAAAGGGTTAGTGGCAGTGGTGGCGATGGTATCAACTGGGACGTTGTTCTCACATCGTCTGTAACACCGAACGGTTTTGATATTGTTCAGTGCACAGGTGTGCCTTCTTTATCATTAAAAATGCGGAATGAATCTAACAGGTTCTCTTCTTTCGGTGTCATCAAAGAGTCTTCAGATCTCAGCGTTTTCTGTCGAGATGTCGCATTGGGTAACTATGACGCTAACTACCTCGACTATGGCACCTACAATTACTCAGGCAACCTGTTCTTGGCTGACGGTCAGATGCTCAGTGGAAAAGGATCAGGAAACACCATCTCATCAAACAAAGGAACAAGACTAAAACCAACCAATGCTAATGCGAAAATCCGACTATTCCCTCATGCGAAATTGAGTGACGTTTTTATAGACGGCGAGTACTCGGAATCTAACAAAGCAGTGGATGGCATATACATTAAACCTCACGACTCGGGTGACACTGATTATGTGTCGGGTGACCCGACTACGCTATCCTGTATTTGGACAAAGGTATCAAACGTAAACATCCAAAAATTTTCCAACAACATCTCAATCGAAGGTGAATCATTTAACTTGTGGTTTGAGAATCTTGTTTCAGTAGCAGGTAGATTTAAGCAAGTCGGCGGAGGCGAAACTACGTTAACTGCCTGTAATTTATCCGACACCACTGACCAGGAAATTGTTTTTAATGACGGTGGTAAAATCTCAGTGCACGGTGGTGCAATCCAAAATACAAACGGTGGCCACCCTTGCATCATCAACCAAGGTAAGATGCTGATCCAAGGAACGTACATGGAGAACGCCCGAGCAGGAGCGAATAACAACGGCTACCTTATAGATAATTACGGCTCACTCACCCTCGTGCAGCCTAAATCTATGGCAATCGCAGATAAAGCGATTCGTGGTAGATACGGCAGTAAAACCTATTTGCGTGATGTGGAGTTTACAGGTAATAACGCCAACACCAATGAAGTTTTCAACGGACGCGGTGACAATAACAATGAGGGTGGTGGATTCCTTTACTTTGAGAACCTTACATTCAGAAGCTGCTTGCCTGCATCCATAAATTACATTGAACACGCAATCGGTGGTTATAGCGACAAAGGTTACTCCATTGAAAGTGGTAATGAAAAAACATTGTATCTGAACGAAGGGGCGAATCTGACTGATTTAACATCTTCAGGTGGCACACTGACTGCAAACAATACAGCAGAGTATTTAACAAATGGGGGATCGCTCCGGTTTGTAGCAGCAGCATCAGTACCAAGCGTTACACTCACAAAAACATTGCGAGGATTGTCTGGTCACTTGGTTATGGTCAGATGGGCTGTTTTAGCTAAACCGTCAGCATCTGACAACACGAGATTCCTAGCGAATATCGGTGGTGATGTGACTTGTGCTTATGTGAATGTTGAATTTGATGCAGACTCAGCTAATGGGAATACTGACAAATGGTATTACATAACAACAAGCGCAGTTCTCGACCCACAACTAACAGAGCATACTATCACATGTAATCTGTTCACGTCTCTTGGTGGCTCTGGAGCAAGTAATGGTACTAGCCATATCGACAGAATTGAGCTTGTTGACTGTGGTTTAGTTCATAAAGTATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
ccf39719496d596746cdbc469d5aaaf58c9f27fa50c38a5a0b42ff423c2543ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7759
Evidence 0,7759
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio parahaemolyticus phage qdvp001 Wang,W., Wang,J. and Lin,H. 2016-07-04 — GenBank