Protein

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Genbank accession
AUR99678.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATPGGLVDKQELIDAQLDTAHLGRVVNSKDASGAPISTSTNRTGGVNKTLDALEGEYQSDIDNFVQVSGQVIVDKTAEFDASIANKEAEADAAIDSYRLLSKGPYAAGIELEDKFQYITYNGESYFATNPPYTTTATTPDNDGNLFISGYTTFENVANKIGNKNELSNSNFLTPSPDAITHPNATPESYVAGTQIFSGVYAGDSGCTVTFIDGRVNCTAGDYKFKLPNTGGLERIPVFTSSVSDYDGIPKTTGVSHALVGDEYVVTVTPTAGDVFSVKLEQGGVATWHEATSYNYQLLQVAIANNVSFGQVALLALGGVSGIHYFWDANTQATFRPSSPISGTITSVGSVGVTVDLVVDGNTITLYKLVKNSYLARAAGLDYQGYWSGGLTIPADSRIDNKAWWQDEIGSFVIPKSDLSFVTGATWDLDSDNWSLEPIMTLRQHWLEGGDVQAFGAIPDYYLPDGSVNPSPTDNREAIQACFDDCVDKNISMTLIGDYYYTGGLTISSRQDESNRRILNAQGALHVNLDGTGFTQALCVGDSSANGTYPLIIDGFLRIINAGTPYVGTGFEAENAAYGDYSVICSGWDIGTYNNGSIFTKYNGRGYLYSDNNLDFKITSNENPGGLRFASNLVTLEDMILNSCQKLEVNTISGLPPLSDTSGGLIRLKRVNFEGQSGVANDAVPMIQIRNAGEVVVAQVMDFIEFDNCGFEAFNANKITINQTKSKIALNNCFFARGANNDFIVHNDDKCFTSFNKTSIYLADQQPASGCIVSRNGSATDAYRSNIESINSVMYGSTGVLFPLHDGLPSNHMILSSSSSKRQVSVQLNSTYPATAVDDYMTNVEINLFNIITDFVGAGWISAEITMHSGTGASYAYSKIVATKQGAAIIYTTDNDLTLSDGRWNLKFPVVQKAEFFKPQFTIDSIVNINNYPLP
Physico‐chemical
properties
protein length:935 AA
molecular weight: 100786,62050 Da
isoelectric point:4,50627
aromaticity:0,10160
hydropathy:-0,16374

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR99678.1
1 935
Domain Start End Length (AA) Confidence
N-terminal 1 201 201 0,8219
Central domain 202 800 600 0,6061
C-terminal 801 935 134 0,9696
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-201
Central
202-800
C-terminal
801-935

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.268.A._10N.286.54.A11
[NCBI] 		1881358 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99678.1 [NCBI]
Genbank nucleotide accession
MG592633.1 [NCBI]
CDS location
range 56139 -> 58946
strand +
CDS
ATGGCAACTCCAGGCGGTCTCGTCGATAAGCAAGAACTTATCGACGCACAACTCGACACGGCACACTTAGGTCGTGTCGTAAACTCTAAGGACGCTTCGGGCGCTCCTATCTCTACATCTACGAACCGTACCGGCGGGGTGAATAAAACACTCGACGCGCTTGAGGGGGAGTACCAATCTGATATTGATAACTTCGTTCAAGTTTCGGGTCAAGTTATTGTTGACAAGACAGCTGAATTTGATGCGTCTATCGCAAACAAAGAAGCGGAAGCGGACGCGGCGATTGATTCTTATCGATTATTAAGCAAGGGACCTTACGCCGCGGGAATAGAGTTAGAGGATAAGTTCCAGTACATTACATATAACGGCGAATCTTACTTTGCAACCAACCCGCCATATACAACAACTGCGACCACTCCAGATAATGACGGCAATTTGTTTATTAGTGGTTACACCACTTTTGAAAACGTAGCAAACAAAATAGGCAACAAAAACGAGCTATCCAACTCAAACTTCCTTACACCGTCACCTGATGCGATCACGCACCCTAACGCAACGCCTGAATCATACGTAGCAGGTACGCAGATTTTTAGCGGTGTATACGCAGGTGATAGTGGCTGTACCGTTACATTTATCGACGGTCGCGTTAACTGCACGGCAGGTGATTATAAATTTAAGCTACCTAACACCGGTGGTCTTGAGCGTATCCCTGTATTTACATCAAGCGTGTCAGATTATGACGGAATCCCAAAAACTACAGGCGTTAGTCACGCGTTAGTCGGCGACGAGTACGTAGTTACCGTTACACCTACTGCTGGTGATGTGTTTAGCGTCAAGCTTGAACAGGGGGGTGTGGCGACTTGGCATGAGGCTACATCTTATAACTATCAACTTCTTCAGGTTGCAATCGCTAACAACGTTTCATTTGGTCAAGTCGCATTGCTAGCACTCGGTGGGGTGTCAGGCATTCACTACTTTTGGGACGCTAACACGCAGGCTACTTTTAGGCCAAGCTCACCAATAAGCGGTACGATTACTAGCGTTGGTTCGGTTGGCGTTACGGTGGATTTAGTTGTTGATGGAAACACAATTACCCTGTACAAGCTAGTTAAAAATAGCTACTTAGCCCGCGCTGCGGGTCTTGATTACCAGGGTTACTGGTCAGGTGGATTGACGATTCCTGCTGATTCACGCATTGATAACAAGGCGTGGTGGCAGGATGAGATCGGAAGTTTTGTAATTCCAAAAAGCGACTTGTCATTTGTTACAGGTGCTACGTGGGATTTAGATTCAGATAACTGGTCGCTAGAACCCATCATGACGCTACGTCAGCACTGGCTTGAAGGGGGTGACGTCCAAGCATTTGGGGCTATTCCTGATTATTATCTACCTGACGGCTCCGTAAACCCATCACCAACTGATAACAGAGAGGCAATACAGGCCTGCTTTGATGATTGCGTTGATAAAAATATATCAATGACACTAATAGGCGACTATTACTACACAGGCGGCCTAACCATATCATCCCGTCAAGACGAGAGTAATCGACGTATATTAAATGCTCAGGGTGCGCTACATGTGAATCTAGATGGGACTGGGTTCACACAGGCTCTTTGCGTTGGAGATAGCTCAGCTAATGGAACATACCCTTTAATTATTGATGGTTTTTTACGAATCATCAATGCGGGGACTCCGTATGTTGGAACCGGATTTGAGGCCGAAAACGCGGCGTACGGTGATTACTCTGTTATTTGTTCTGGTTGGGATATTGGAACATATAACAATGGTTCGATTTTTACAAAATATAATGGCAGAGGATATTTGTATTCAGATAACAATCTGGATTTTAAAATAACATCTAACGAAAACCCCGGCGGCCTTAGGTTTGCGTCTAACCTAGTAACACTAGAAGACATGATTTTAAACTCATGTCAAAAGTTAGAGGTAAATACCATATCCGGATTGCCACCACTATCTGATACAAGCGGTGGGTTGATAAGGCTCAAGCGCGTTAACTTTGAAGGTCAGAGCGGGGTTGCTAACGACGCCGTACCGATGATCCAAATCCGAAATGCCGGAGAGGTTGTTGTTGCTCAGGTAATGGATTTTATTGAGTTTGATAACTGCGGGTTTGAAGCGTTTAACGCCAATAAAATTACAATAAACCAGACAAAGTCAAAAATAGCACTAAACAACTGCTTCTTTGCTAGAGGTGCTAACAATGATTTTATCGTACATAATGATGATAAGTGTTTTACATCGTTCAACAAAACATCTATTTATTTAGCCGATCAACAGCCAGCGTCTGGATGTATAGTATCTAGAAATGGCTCAGCCACTGACGCGTACCGTTCAAACATCGAGTCAATAAATAGTGTGATGTATGGTAGCACGGGAGTTCTTTTCCCTTTGCACGATGGACTGCCATCTAATCACATGATTTTGTCGTCATCATCTAGTAAGAGACAAGTGTCTGTACAACTAAATAGCACTTATCCTGCAACAGCCGTTGATGATTATATGACAAACGTCGAGATAAATTTATTCAATATAATTACTGACTTTGTCGGAGCAGGGTGGATTTCAGCAGAAATTACGATGCATTCCGGCACAGGTGCAAGCTACGCATACTCTAAAATAGTAGCAACAAAACAGGGTGCGGCAATAATATACACAACAGATAATGATTTAACATTGAGTGATGGTAGGTGGAATCTTAAATTCCCAGTAGTGCAGAAAGCTGAGTTTTTCAAGCCTCAATTTACAATTGATTCAATAGTTAACATTAATAACTACCCGTTGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29b3d06da8110d89225768a3191481fe5a22a086ddde693ae5baed18f43676dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5763
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank