Protein

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Genbank accession
QCW19427.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MKMADLSLYKVDLDTPQPNGRKGESPRAAFTKYNDLLAHLEAGGGGSFISATEPTQTFAFMEWIDTSTTPAIIKRRNADDNAWITIGSYEKPITDFVDKVDGKGLSTNDYTNEDKVIVDGVGDALNAGKVLSTNDYTNEDKAIVDGVGNALNTKVDKVTGKELSTNDYTDEDKNIVKSVLWTSDANFIAGMCSVQSGQQYVAVQNSGPNNGGAVNPSTDTDWSHWKPTWALNQVENRLKGNQNWNIPGRTGHPLPDATPRDYPVGAEIALGVFTELEITNATLIDRVFSADAGALKINNNYDISGFFGIKLHDNRIAVAAPNSISGTGVSKTTSFIYVNINRLIALGIPRGAHKFVGCSELPGIWPDVSEEESADAVLFNKEYASVPIGAEIAFDTPPPTNDPRFRFVKLTADDAYNGSLLNNKVISGTAPNLVVKMTVNSSLSPINGQQIFMLNTMGAMPTPGLTSGVIIQDAMRNLTGSVRALYTGGSEQYDGSLAMSIYGGSPAKVGATGVDPGANYTISFDASLQVPTADRFQVFGVSQVFYKRIF
Physico‐chemical
properties
protein length:550 AA
molecular weight: 59033,27090 Da
isoelectric point:4,84998
aromaticity:0,08545
hydropathy:-0,25418

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va_90-11-287_p41
[NCBI] 		2565520 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW19427.1 [NCBI]
Genbank nucleotide accession
MK672799.1 [NCBI]
CDS location
range 22284 -> 23936
strand -
CDS
ATGAAAATGGCTGATTTATCGCTATATAAAGTTGATCTAGATACACCACAACCAAACGGAAGAAAAGGCGAAAGCCCAAGAGCCGCGTTTACAAAATATAACGACCTTCTCGCTCACCTTGAAGCTGGTGGTGGTGGTAGCTTTATTTCAGCTACAGAACCAACACAAACATTCGCATTCATGGAGTGGATAGATACATCAACCACGCCAGCTATTATCAAGCGAAGAAACGCAGATGATAATGCATGGATAACGATCGGTAGTTATGAAAAGCCAATCACTGACTTTGTGGATAAAGTCGACGGAAAGGGACTTTCAACCAACGACTACACCAATGAAGATAAAGTAATTGTTGATGGTGTTGGTGATGCGCTTAATGCAGGTAAGGTTCTATCAACCAACGACTACACCAATGAAGATAAAGCAATTGTTGATGGTGTTGGCAATGCGCTTAACACGAAAGTAGATAAGGTTACCGGAAAAGAACTTTCAACCAACGACTATACCGATGAAGATAAAAACATCGTAAAGTCTGTATTATGGACAAGTGATGCAAATTTCATTGCTGGCATGTGCAGCGTACAAAGCGGCCAGCAGTACGTCGCCGTGCAAAATAGCGGACCAAACAACGGCGGCGCTGTTAATCCATCAACAGACACAGACTGGAGCCATTGGAAACCAACTTGGGCATTAAACCAAGTCGAAAACCGCCTGAAAGGAAATCAAAACTGGAATATACCGGGGCGCACTGGGCATCCACTTCCTGATGCGACGCCAAGGGACTATCCCGTTGGAGCTGAAATTGCTCTTGGTGTTTTTACAGAACTAGAAATAACCAATGCAACATTGATTGATCGGGTTTTTTCGGCGGATGCTGGCGCGCTAAAAATTAATAACAATTACGATATTTCAGGATTTTTTGGAATTAAATTACACGACAATCGTATTGCTGTAGCTGCTCCAAATTCTATATCCGGCACCGGAGTATCGAAAACAACAAGCTTTATTTATGTAAATATAAACAGACTTATCGCGCTAGGAATACCACGCGGAGCACACAAATTCGTGGGCTGTAGCGAACTTCCCGGCATTTGGCCAGATGTGAGTGAGGAAGAGTCTGCTGATGCTGTTCTGTTTAACAAAGAGTATGCGTCAGTGCCGATTGGTGCTGAAATAGCGTTCGATACGCCACCACCAACAAATGACCCGCGTTTCCGTTTTGTTAAGCTAACTGCTGACGATGCTTACAATGGTAGCCTTCTCAATAACAAAGTGATTTCTGGAACGGCTCCAAATTTAGTTGTGAAAATGACCGTAAACTCTTCGCTGTCACCTATCAACGGACAGCAAATTTTCATGCTAAACACAATGGGAGCAATGCCAACTCCGGGCCTAACTTCTGGTGTGATTATTCAAGATGCAATGCGTAACTTAACTGGCTCTGTTCGCGCCCTGTATACTGGCGGCAGTGAGCAATACGATGGCTCTCTAGCTATGTCGATTTACGGCGGTAGTCCTGCTAAAGTTGGAGCTACAGGAGTCGATCCAGGCGCTAATTACACAATATCTTTTGATGCATCACTGCAAGTTCCAACAGCAGACAGATTCCAAGTTTTTGGGGTTAGTCAAGTATTCTACAAGAGGATTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40c918cdcbb677c1224c1dd56c08d05a6881f944151a706764dfd7fd17a4b692
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5319
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large phenotypic and genetic diversity of prophages induced from the fish pathogen Vibrio anguillarum Andersen,N., Castillo,D., Kalatzis,P. and Middelboe,M. — — GenBank