Protein

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Genbank accession
AVR55806.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIISKKTLADQGQLNKNVILWAIDIGSELALLNRPMTVRQNPENTMFVEYVDDITPEEIEAGKQAIKEYCISNNIMDIYYDFLIATTQESNKLDILKEKKRYEIQSNRDKALENGIVYNGHTFQTREKDKLNINGAATNLMLDIQSGTNSVSEIIWIDINDEKVTFNPQEFLKFASMVAYNTQEITFKANVLKAKIEEAKTIEELEKIQWDDSAKTTQKKR
Physico‐chemical
properties
protein length:221 AA
molecular weight: 25435,61880 Da
isoelectric point:4,99645
aromaticity:0,07692
hydropathy:-0,52308

Domains

Domains [InterPro]
DC_1876
STR
1–160
DC_1876
IPR025484
STR
96–205
IPR025484
AVR55806.1
1 221
Architecture
STR
STR 1-205 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CP39
[NCBI] 		2136799 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVR55806.1 [NCBI]
Genbank nucleotide accession
MH107028.1 [NCBI]
CDS location
range 119646 -> 120311
strand -
CDS
ATGATAATATCTAAAAAAACTCTAGCTGATCAAGGTCAATTGAACAAAAATGTTATATTATGGGCAATTGATATAGGATCAGAGTTAGCATTACTAAATAGACCTATGACAGTTAGGCAAAATCCAGAGAACACGATGTTTGTTGAATATGTTGATGATATTACACCTGAAGAAATTGAGGCTGGAAAACAAGCAATTAAAGAATATTGTATATCAAATAATATTATGGATATATATTATGATTTTTTAATAGCAACTACTCAGGAAAGTAATAAATTAGATATCTTAAAAGAAAAGAAAAGGTATGAGATCCAATCAAATAGAGATAAAGCTCTAGAAAATGGAATTGTGTATAATGGTCATACTTTCCAAACAAGGGAAAAAGATAAACTAAATATTAATGGAGCTGCAACTAATTTAATGCTTGATATACAAAGTGGAACTAATTCAGTTTCTGAAATCATTTGGATTGACATAAATGATGAAAAAGTAACTTTTAACCCACAGGAATTTTTAAAGTTTGCCTCAATGGTTGCATATAACACACAAGAGATTACTTTTAAAGCCAATGTTTTAAAAGCAAAAATAGAAGAAGCTAAAACAATTGAGGAACTGGAAAAAATACAATGGGATGATTCAGCTAAAACAACACAAAAGAAAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2bc02dcf7615c1314338e89df5a3cb3b2f24edc9ad0d252b3f0d25a5d988beb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9279
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, identification, CP39 whole genome analysis and application of Campylobacter jejuni 11168 phage Song,Z., Huang,J., Tong,Y. and Zhao,F. 2022-02-26 — GenBank