Protein

View in Explore
Genbank accession
DBA08474.1 [GenBank]
Protein name
Tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAWYSTGTVAVTANSPTVTGTGTQFSSNARVGDAFRGPDGRWYEVTNVASSTVISIKPNYQGSTASGQAYAVAPILGYDKDLSDRFNLIANQWGATLAGIKPWALSANAAAARGDLGLGSAAVREALGSSGALYSRDSILGAVSQSSGVPTGAVIDRGSNANGEYVRFADGTQICTMSINVNDQAIDSAYGSLFQGARTWSFPVAFSGVPAVSVGLFRWGSAASWGSVATLPSTTSATLRGFDIAARPAGTSTAISATAIGRWF
Physico‐chemical
properties
protein length:264 AA
molecular weight: 27031,61770 Da
isoelectric point:8,78364
aromaticity:0,09848
hydropathy:0,07538

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS-D14H
[NCBI] 		2965063 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DBA08474.1 [NCBI]
Genbank nucleotide accession
BK061480.1 [NCBI]
CDS location
range 543 -> 1337
strand -
CDS
ATGGCGTGGTACTCAACCGGAACCGTGGCGGTGACCGCAAATAGCCCGACCGTTACCGGTACCGGCACACAGTTCTCGTCCAATGCCCGAGTCGGCGACGCATTTCGCGGACCCGATGGACGTTGGTACGAGGTCACAAACGTCGCCAGTTCGACGGTCATCTCGATCAAGCCCAACTACCAGGGCAGCACGGCCAGCGGCCAGGCCTATGCGGTGGCGCCGATCCTGGGCTACGACAAGGACCTGTCGGATCGATTCAACCTGATCGCCAACCAGTGGGGGGCAACCCTGGCGGGGATCAAGCCCTGGGCGCTTTCTGCAAATGCGGCGGCAGCGCGGGGGGATCTCGGCCTCGGCAGTGCGGCGGTACGGGAGGCGCTCGGTAGTTCGGGCGCGCTGTACTCTCGAGACAGCATTCTGGGCGCCGTTTCGCAGTCGAGCGGCGTACCGACCGGTGCGGTGATTGATCGCGGGAGTAACGCGAACGGGGAGTATGTGCGGTTTGCGGATGGGACGCAGATATGCACGATGAGTATCAATGTCAACGACCAGGCCATCGACTCTGCCTACGGCTCTCTCTTCCAAGGTGCTAGGACGTGGTCATTCCCGGTGGCATTTTCGGGTGTGCCGGCGGTGTCCGTGGGTTTGTTTCGGTGGGGTTCAGCCGCGAGTTGGGGAAGTGTCGCAACCCTCCCCAGCACTACATCTGCAACGTTGCGAGGTTTCGATATTGCGGCGCGGCCTGCAGGGACCTCTACCGCTATTTCTGCAACGGCCATTGGGAGGTGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f53bb4f7d88f3d487ce2a63b87d0237d6500e13d867f41d4b756ea6dbb609662
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8175
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage identification and molecular analysis in the genomes of 53 Pseudomonas aeruginosa strains isolated from critical care patients Gonzalez de Aledo,M., Blasco,L., Lopez,M., Ortiz-Cartagena,C., Bleriot,I., Pacios,O., Hernandez-Garcia,M., Canton,R. and Tomas,M. 2023 — GenBank