Protein

View in Explore
Genbank accession
XYN57443.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,67
Protein sequence
MLYGWSFNALIKALGNVAFKNTGMKSGDVASGDDTRILRALQKDKALSDVSSRYESITNIGGFPFKGNLKSGENLNDLTGKSYGVHVCETSGVADIGMNYPEKSAGTLVVYSTGNNDCVQLYHLFGRSSFYKRINYSGGGGWSKWELFTSNSDNLASLVNKDVARDNISCWRLQNGLGSSHLDSYKGNSYGVYYQNMSANASQGNGYPKGVGAGTLLVLQNHANGTDGCTQVYIDWYNPRQFWIRNFLKSQSRWSTWESPMFSSRDLQDLEDIEKARVNLGLYSSIYPIGVVIMFDSNTNPNKEFKNTTWSEIKDGRILRASKDGHTGTVGSDSFTLTEENIPRHSHSISMTIGYSSDHTHWGGWNAPGNTPWDERKPNESEYDAYMRLTGRWTDSSGTDNQGRHNRRYTSKDGKHTHPFSISLSYAYDGPTTPVTFYMSCRHYKLWKRTA
Physico‐chemical
properties
protein length:451 AA
molecular weight: 50458,19940 Da
isoelectric point:8,69732
aromaticity:0,11973
hydropathy:-0,68381

Domains

Domains [InterPro]
DC_0033
STR
11–451
DC_0033
cd19958
STR
66–146
cd19958 cd19958 IPR053827
XYN57443.1
1 451
Architecture
STR
ATT
STR
STR 11-283 | ATT 284-384 | STR 385-451
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYN57443.1
1 451
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,5047
Central domain 233 431 200 0,0179
C-terminal 432 451 19 0,9975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-431
C-terminal
432-451

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage PA_03
[NCBI] 		3447912 No lineage information
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYN57443.1 [NCBI]
Genbank nucleotide accession
PV764747.1 [NCBI]
CDS location
range 50360 -> 51715
strand +
CDS
ATGCTTTATGGTTGGTCTTTTAATGCACTAATAAAAGCACTTGGAAATGTTGCATTCAAGAACACTGGTATGAAGTCTGGTGATGTTGCATCAGGAGATGACACCAGAATATTAAGAGCTTTACAAAAAGATAAAGCTTTATCTGACGTATCTTCTAGGTATGAAAGCATTACAAATATTGGAGGCTTTCCTTTCAAAGGAAATTTAAAGTCTGGAGAAAACTTAAACGACCTAACTGGTAAGTCTTACGGTGTACATGTTTGTGAGACATCTGGTGTTGCGGATATTGGGATGAATTACCCAGAAAAATCTGCCGGCACTTTAGTAGTATATTCAACAGGAAACAATGACTGTGTGCAATTATATCATTTGTTTGGTAGGTCGAGTTTCTATAAAAGGATAAATTACTCAGGGGGAGGTGGTTGGAGTAAATGGGAGCTTTTTACATCAAACTCAGACAATTTGGCAAGCCTAGTAAATAAGGATGTTGCAAGAGACAACATAAGTTGTTGGAGGTTACAAAACGGATTAGGTTCCTCCCATTTAGATTCTTACAAAGGGAATTCCTATGGTGTCTATTATCAAAACATGTCTGCCAATGCAAGCCAAGGAAATGGGTATCCGAAAGGTGTTGGAGCAGGGACATTACTTGTATTACAGAACCATGCCAATGGAACAGATGGATGTACTCAAGTCTATATAGACTGGTACAACCCAAGACAGTTTTGGATAAGAAATTTCCTCAAAAGTCAATCAAGGTGGTCAACTTGGGAGTCTCCAATGTTTTCAAGCCGTGATCTACAAGACTTAGAGGATATTGAAAAAGCAAGGGTTAACTTAGGTCTTTACTCTAGCATTTATCCAATCGGTGTTGTAATAATGTTTGATAGTAACACAAACCCAAACAAAGAGTTTAAGAATACTACTTGGTCTGAAATAAAGGATGGCAGGATTCTTAGGGCATCTAAAGATGGACATACTGGTACAGTTGGCTCTGACTCGTTCACTCTAACAGAAGAAAATATCCCAAGGCATTCTCACTCAATCTCTATGACAATCGGTTATAGTTCAGACCACACACATTGGGGAGGTTGGAATGCTCCAGGAAACACCCCTTGGGATGAGAGAAAACCTAACGAGAGTGAGTATGATGCCTACATGAGGTTAACAGGCAGGTGGACAGATTCTTCTGGTACAGATAATCAAGGGCGACACAACAGAAGATATACATCTAAAGATGGAAAGCATACTCACCCGTTTAGCATCTCTTTATCTTACGCATACGATGGTCCAACAACACCAGTAACATTCTACATGTCTTGCAGACATTACAAGTTGTGGAAAAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9b63aeae234062010e61bc6324383bef52b295b0b1a121139182d18aec9c8039
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7611
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50