Protein

Genbank accession
QWY83536.1 [GenBank]
Protein name
pectin lyase fold domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSQLPLDQAIPRFKENEERIDKFVNGTDLEVWTPEVGAPLPTIAKFLKDKEAEIDLANTGIMAEAIAAKEAAELAATNAATQVTLATAAKDAALQAETNAEAAEASASASAASASAAAQTEITNRIASQEEAEAGVNNTELMTPLRTKQQVDISVEEAVDTAIGPAVDSAVATALVPINSSLALLTLKHGVTYWDLAKTLVGNGTTNDTAAFLAALNAAKLAGIKLIISSNPNHKYKIIEAEIPGSFEFYMYGASFVADYNTLYANTCATIMKTSTEGNHYDITIRDAVIDGQSTGSQNASGAGNRPLLFFKGGNIELDKCIVQKGANRGSFSGTTYMDGLQGEVQFNNPREVYIHDCIFQHSPGEQIHILSDKSSAVQQPLVRIERCKFIKERQDQAGEYWSSSSVVIYKPSKTSYITDCDFETHIKSAINWFGAGLVQNCRFHGVKDSQAIDFDEAGAFGIDQIVVRGCSIHNVLGGYPIRISGRNVIVEDCDINRCQNGIYIETQGTTDAMFTGVGVTSPRSLYNVFLKNITGNGNEVPGAEAEVLQNASFGATGGWTVPSPWVISGGQATRTGGSAGNMYADVSGIAAGETATLSVAIASSSHALKMAFYDAAGVALGVETAFFTGAGTFEEEVIVPANAARLYFIASTSSLSCVLDWASCISRKTVTNTFIKILGLSSTAPAVVHVEGVGNHQHSTGGNFPSANEEYGIDAENCYLFLKGALSHGATSMIRMKGYAKFKAQDCRFFLQNAMNLLTFDGATIRDAVFEDCETTESSWTGKHVVNLNTPTWSGRLYRNRAGDIDTTDTGIPFTTNYTTTGTT
Physico‐chemical
properties
protein length:825 AA
molecular weight: 87899,28130 Da
isoelectric point:4,95707
aromaticity:0,08121
hydropathy:-0,09794

Domains

Domains [InterPro]
IPR012334
200–573
IPR012334
IPR011050
201–539
IPR011050
IPR039448
345–510
IPR039448
QWY83536.1
1 825
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X2_28B
[NCBI] 		2836086 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY83536.1 [NCBI]
Genbank nucleotide accession
MW960036 [NCBI]
CDS location
range 64556 -> 67033
strand -
CDS
ATGTCTCAACTTCCTCTGGATCAAGCTATTCCACGCTTTAAGGAGAATGAAGAACGGATTGATAAGTTCGTCAATGGAACTGATCTTGAAGTTTGGACTCCTGAAGTGGGTGCTCCACTTCCTACAATCGCTAAGTTCCTTAAGGATAAGGAAGCTGAGATTGATCTTGCTAACACTGGGATCATGGCAGAAGCAATAGCTGCTAAGGAAGCTGCTGAACTTGCTGCCACTAATGCAGCAACCCAAGTTACATTAGCAACTGCTGCCAAAGATGCAGCACTTCAAGCTGAGACAAATGCTGAAGCAGCAGAAGCATCTGCTAGTGCTAGTGCAGCTTCTGCCAGTGCGGCGGCTCAGACTGAAATTACGAACAGAATTGCTTCCCAAGAAGAAGCTGAAGCTGGTGTCAATAATACCGAGCTTATGACTCCATTGCGTACAAAACAGCAGGTAGACATTTCAGTTGAAGAAGCTGTAGATACTGCTATAGGTCCGGCAGTTGATTCTGCTGTTGCTACGGCACTGGTTCCTATTAACTCCAGTTTAGCTCTTTTGACTTTGAAACATGGAGTAACCTATTGGGATCTTGCTAAAACTCTTGTTGGTAACGGCACTACTAATGATACAGCAGCGTTTCTTGCTGCCCTTAATGCTGCAAAACTTGCTGGTATTAAGCTGATCATCTCATCTAATCCAAATCATAAATACAAGATTATTGAAGCTGAGATTCCTGGTTCTTTTGAATTCTATATGTATGGTGCGAGTTTTGTAGCTGACTACAATACCCTCTATGCCAATACCTGTGCGACTATTATGAAAACAAGCACAGAAGGAAACCATTACGATATTACTATTCGTGATGCTGTGATCGATGGTCAGAGTACTGGATCTCAGAATGCTTCGGGAGCAGGCAATAGACCTCTTTTGTTTTTCAAAGGCGGAAATATTGAACTGGATAAATGTATCGTTCAAAAAGGTGCTAACAGAGGTTCATTCTCTGGTACTACCTACATGGATGGTTTGCAGGGGGAAGTACAATTTAACAATCCCAGAGAAGTCTACATTCATGACTGTATCTTCCAGCATAGTCCTGGCGAACAGATCCATATTCTGAGTGATAAATCTTCCGCAGTTCAACAACCGCTGGTGAGGATTGAACGCTGTAAATTTATTAAAGAACGTCAAGATCAAGCTGGAGAGTATTGGTCAAGTTCGTCTGTGGTTATCTACAAACCATCTAAGACCAGCTATATTACCGACTGCGATTTTGAAACTCATATCAAATCTGCGATCAATTGGTTTGGTGCTGGTCTTGTTCAGAACTGCCGATTCCATGGAGTAAAGGATAGTCAAGCAATCGACTTCGATGAAGCAGGTGCTTTCGGTATTGACCAAATCGTTGTTCGTGGTTGCTCTATCCATAACGTTCTTGGTGGTTACCCAATCCGAATTTCTGGTCGAAATGTGATTGTTGAAGATTGCGATATTAATCGTTGTCAAAATGGTATCTACATTGAAACCCAAGGAACAACTGATGCAATGTTTACCGGTGTCGGTGTTACTTCACCACGCAGCCTCTACAATGTGTTTCTGAAGAACATCACAGGCAATGGTAATGAGGTTCCTGGTGCAGAAGCTGAGGTACTTCAGAACGCTAGCTTCGGTGCAACTGGTGGATGGACAGTACCATCCCCTTGGGTAATTTCTGGTGGACAAGCCACTAGGACAGGTGGTTCCGCAGGTAATATGTATGCAGATGTTTCTGGTATTGCAGCAGGAGAGACGGCAACATTGAGTGTTGCTATCGCGTCCAGTTCACATGCACTTAAGATGGCATTTTATGATGCAGCAGGTGTTGCATTGGGTGTGGAAACTGCATTCTTTACTGGAGCAGGAACATTTGAAGAAGAAGTCATTGTACCTGCAAATGCTGCTCGCCTATATTTCATTGCTTCCACATCATCTCTTAGCTGTGTACTGGATTGGGCATCCTGTATCTCCCGTAAGACGGTAACCAATACGTTCATTAAAATACTTGGCTTGAGTTCGACTGCACCTGCTGTCGTACATGTTGAAGGTGTTGGTAACCATCAACATAGCACTGGTGGTAACTTCCCAAGTGCTAATGAAGAATATGGTATCGATGCTGAGAATTGCTATCTCTTTCTCAAGGGAGCACTTTCTCATGGTGCCACCTCAATGATTCGTATGAAAGGTTATGCAAAGTTCAAAGCTCAAGATTGCCGCTTCTTCCTACAAAATGCGATGAATCTTCTAACCTTTGATGGAGCTACCATTAGGGATGCTGTGTTTGAGGATTGTGAAACTACTGAGAGTTCATGGACCGGTAAACATGTAGTCAATCTCAATACGCCTACATGGTCAGGTAGACTCTATAGGAATCGTGCAGGTGATATTGATACCACAGACACAGGTATCCCTTTCACAACGAACTATACAACTACAGGGACAACGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
d5f012164989126c26f984021a7180d1c26b095cf40bc337697142d0e68cb30b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7128
Evidence 0,7128
Download PDB

Literature

Title Authors Date PMID Source
The Hidden Diversity and Expansion of Phages in the Symbiotic Bacteria Rhizobium Gonzalez,V., Santamaria,R.I., Bustos,P., Cauwenberghe,J. and Juarez,S. 2017-09-25 — GenBank