Protein

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Genbank accession
QKM75966.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARFSSTSLVSQAVKNLKSGISQQPEILRFAEQGSEQINGWSSESEGLQKRSPIVFTKNLGPKGHIGEYPYVHLINRDEYEQYYACFSGSDVKVFDLSGKEYLVRGDMSYIQSPNPRDDLRMITIADYTFIANNKKTVGRNTTDKSNGGTFKEKESVLIVVRGGQYGRSLYVNLNGGQQAKVDLPDGSQASHSKQTDAQVIAENLATQLRTNLAKLNNGTWTVTVGQGYIYIESPAGVDITDFSTKDGYADQLIYPVSHYAQTFAKLPPVAPDGYLVHIVGDTSKTADAYYVQYDADRKVWKEVIGWNQDLTFVKETMPHALIRAADGNFDLKPLDWNDRKSGDDDTNPFPSFVGSTINDVFFYRNRLGFLSGENVILSRTARYFNFFPSSVANLSDDDPIDVAVSHNRVSILKYAVPFTEELLLWSDEAQFTMSASGVLTSKTIELNLTTQFDVYDRARPYGIGRNVYFASPRATFTSISRYYAVQDVSAVKNAEDMTAHVPSYIPNGVFNIHGSSTENFASVLTSGAESRIYIYKFLYLNEELRQTSWSHWEFGSNVRILAASSINSNMFVIMENGENVFMGYIPFTKDTVDFADEPYRIYLDAKVPYTIPTGTYNEDYNETTIDLMTIYDMKFEKGTISSVAPDGKVWRFEEPEVGWNNAPKLVYDGNLEGVKMYIGFNFDFRYVFSKFLIKKTEDDGTISTEDTGRLQLRRAWLNYENTGAFDVEVENLSRLWTYTMGGGRLGSDNVRVGWLSLGTGQFRFPVAGNALYNTVRILSDHTTPLNVIGCGWEGAYTSRTSGI
Physico‐chemical
properties
protein length:804 AA
molecular weight: 90249,66880 Da
isoelectric point:5,17254
aromaticity:0,12562
hydropathy:-0,36704

Domains

Domains [InterPro]
IPR058003
TTP
8–804
IPR058003
QKM75966.1
1 804
Architecture
TTP
TTP 8-804
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKM75966.1
1 804
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9911
Central domain 143 341 200 0,1582
C-terminal 342 804 462 0,1843
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-804

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage P1723
[NCBI] 		2736274 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Foetvirus
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKM75966.1 [NCBI]
Genbank nucleotide accession
MT465573 [NCBI]
CDS location
range 24642 -> 27056
strand +
CDS
ATGGCTCGTTTTAGTTCCACATCATTAGTAAGTCAGGCCGTTAAGAACCTCAAGAGCGGTATCAGTCAACAGCCGGAGATTCTACGATTTGCCGAGCAGGGTAGCGAACAGATTAACGGATGGTCTTCAGAGTCTGAAGGTCTCCAGAAGCGCTCTCCTATCGTGTTCACTAAGAACCTTGGGCCTAAGGGACACATCGGGGAATATCCGTATGTCCACCTGATTAACCGAGACGAGTACGAACAGTACTATGCGTGTTTCTCTGGGAGCGACGTTAAGGTATTCGACCTGTCTGGGAAGGAGTATCTGGTCCGTGGCGACATGTCCTACATCCAGTCACCTAACCCTCGTGATGACCTGCGCATGATTACCATTGCCGACTACACCTTCATTGCAAACAACAAGAAGACTGTAGGTCGAAACACTACGGATAAGTCCAACGGTGGAACCTTCAAGGAGAAGGAGAGCGTACTTATTGTGGTACGTGGTGGTCAGTACGGTCGCAGCCTTTACGTTAACCTTAACGGTGGACAGCAAGCCAAAGTGGACCTTCCTGATGGTTCCCAGGCATCACACTCAAAGCAGACCGATGCTCAGGTGATTGCTGAGAACCTTGCCACACAGTTACGTACTAACCTCGCTAAGTTGAATAACGGCACGTGGACGGTGACAGTTGGTCAAGGTTACATTTACATTGAGTCACCTGCTGGAGTTGACATCACGGACTTCTCGACGAAGGATGGTTACGCAGACCAGCTCATCTACCCGGTGAGTCACTACGCTCAGACGTTCGCTAAGTTACCTCCGGTTGCCCCTGATGGCTACTTAGTGCACATCGTTGGCGATACCTCAAAGACAGCCGATGCGTACTACGTTCAGTATGACGCTGACCGTAAGGTCTGGAAGGAAGTCATTGGGTGGAACCAAGACCTAACGTTCGTCAAAGAGACAATGCCACATGCACTGATTCGTGCGGCTGATGGTAACTTTGACCTTAAGCCTCTCGATTGGAATGACCGTAAGTCTGGGGATGATGATACCAACCCTTTCCCATCCTTCGTCGGCTCTACGATTAACGATGTGTTCTTCTATCGTAACCGTTTAGGGTTCCTTTCTGGTGAGAACGTTATTCTGTCCCGCACAGCTCGTTACTTTAACTTCTTCCCATCCAGTGTGGCTAACCTTAGTGACGATGACCCGATTGATGTGGCAGTATCGCACAACCGAGTGTCCATCCTGAAGTATGCCGTACCATTCACTGAGGAGCTGCTCCTGTGGTCTGATGAAGCTCAGTTCACCATGAGTGCCTCTGGGGTCCTGACTAGCAAGACCATTGAATTGAACCTGACGACTCAGTTCGATGTGTATGACCGGGCGCGTCCTTACGGTATCGGGCGTAACGTCTACTTTGCATCACCACGAGCCACCTTCACGTCAATCTCACGGTATTACGCTGTGCAGGATGTGAGTGCCGTCAAGAACGCTGAGGACATGACAGCCCACGTTCCGAGCTACATCCCGAACGGTGTGTTCAACATTCATGGGTCCTCTACGGAGAACTTCGCGAGTGTCTTAACGTCTGGTGCTGAGTCTCGCATCTACATCTACAAGTTCCTGTACCTCAACGAAGAACTCCGTCAGACCTCTTGGTCACATTGGGAGTTCGGTAGTAATGTGCGGATTCTTGCTGCAAGCTCCATCAACAGCAACATGTTCGTCATTATGGAGAACGGGGAGAATGTCTTCATGGGATACATCCCGTTCACTAAGGACACCGTGGACTTCGCTGATGAGCCATATCGAATCTATCTGGACGCTAAGGTGCCGTATACGATTCCAACGGGAACCTACAACGAGGACTATAACGAGACCACCATCGACCTCATGACCATCTACGACATGAAGTTCGAAAAGGGAACAATTAGTTCTGTAGCTCCTGACGGTAAAGTGTGGAGATTCGAGGAGCCAGAGGTAGGTTGGAACAATGCGCCAAAGCTGGTCTACGATGGGAACCTTGAGGGTGTCAAGATGTACATTGGGTTCAACTTCGACTTCCGCTATGTATTCAGTAAGTTCCTCATTAAGAAGACCGAAGACGATGGGACAATCTCTACCGAAGACACCGGGCGCTTACAGTTACGCCGAGCGTGGTTGAACTATGAGAACACTGGAGCGTTTGACGTTGAGGTTGAGAACCTTAGCCGACTGTGGACCTATACGATGGGTGGGGGCCGATTAGGCTCGGACAACGTAAGGGTCGGGTGGTTGTCGTTAGGTACTGGTCAGTTCCGATTCCCTGTGGCTGGCAACGCCTTGTACAACACTGTGCGTATTCTCAGTGACCACACAACTCCACTGAACGTTATCGGCTGTGGTTGGGAAGGTGCCTACACGTCCCGCACTTCAGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
31475c9e1f15582121cdfa937c083070ab9b0abf1d0c4b5feabefd06f21f1d3d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3175
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome analysis of a novel lytic T7-like phage P1723 Zhong,P., Yang,S., Cheng,Z., Xu,Z. and Luo,P. 2023-11-27 — GenBank