Protein

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Genbank accession
XKC24737.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MCDIPVNYNPITKTWAGIWDGRFKKGWTDNNALIAREIIMNRDWGKRASEPQLRVDNTSLMEAIKYCDEKVPDLNGEMKPRHTFNEAITAERDIDEYLKYVLGSFHATSREMFGVYRFFIDKPKTPRFFVSSETVFQTGLSYYRSDLSSRYNFMRVIFANAANDYQEDRRVLLDEESQAVNGIIPYAFQCVGATNLSEAIRQAVYLMYTNKEETTFITFTQPRLGHVVDLYDNFYIFDKEMDWGLGTRISSYDPATQLVTLRDALVEMSSSEVYTMYFHTQDTVMTAFVKSINPHQLLVTEVEKLDDVNLYLNSIENAPIGLAGGVYGQPKIFRVLSIEQTDSSDVAQGEMFLFKGAIVAPIKYQAIDNINDPSLVNFKYNSLDLTYKRDRIPSMPFDVRLWLRDLSNALGQPTYGITFNTIDPAHKYKITWVNKETGEARETILFDTEGVLAPAFLRQPV
Physico‐chemical
properties
protein length:461 AA
molecular weight: 52951,39730 Da
isoelectric point:5,10820
aromaticity:0,12364
hydropathy:-0,30629

Domains

Domains [InterPro]
DC_0118
STR
1–207
DC_0118 DC_1465
IPR053171
Unmapped
4–269
IPR053171
XKC24737.1
1 461
Architecture
STR
RBD
STR 1-207 | RBD 260-460 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage Mystique
[NCBI] 		3373405 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii AB5075
[NCBI] 		1116234 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC24737.1 [NCBI]
Genbank nucleotide accession
PQ438181.1 [NCBI]
CDS location
range 47755 -> 49140
strand -
CDS
ATGTGTGACATTCCCGTCAACTATAATCCTATCACCAAAACTTGGGCAGGCATCTGGGATGGTCGATTCAAGAAAGGTTGGACCGACAATAATGCTCTAATTGCGCGTGAGATCATCATGAACCGCGATTGGGGTAAACGAGCTAGTGAGCCGCAGCTACGTGTAGATAATACCAGCTTGATGGAAGCTATCAAGTATTGTGATGAGAAAGTACCTGACCTTAATGGTGAAATGAAACCTCGTCACACTTTTAATGAAGCCATCACTGCTGAACGTGACATTGACGAATACCTGAAATATGTTCTTGGTTCATTCCATGCGACCAGTCGGGAGATGTTTGGTGTTTATCGCTTCTTTATTGATAAACCAAAGACCCCTCGTTTCTTTGTCAGTTCAGAAACAGTATTCCAAACTGGTTTAAGCTATTACCGTTCTGACCTTTCATCACGGTATAACTTCATGCGTGTAATTTTTGCCAATGCTGCGAACGATTACCAAGAGGACCGTCGTGTTCTTTTAGATGAAGAAAGCCAAGCGGTCAATGGTATTATTCCTTACGCATTCCAATGTGTTGGTGCAACTAATTTAAGTGAAGCTATCCGTCAGGCGGTTTACTTAATGTACACCAATAAAGAGGAAACCACTTTCATCACATTCACCCAACCTCGTTTGGGTCATGTTGTTGATTTATATGATAATTTCTATATCTTCGATAAAGAAATGGATTGGGGTTTAGGTACTCGTATTTCTAGTTACGACCCAGCAACCCAGTTGGTTACCCTTCGTGATGCTTTGGTTGAAATGTCATCTAGTGAAGTTTACACAATGTATTTCCATACACAGGATACTGTGATGACTGCATTCGTGAAAAGTATCAACCCGCACCAGTTACTGGTGACAGAAGTTGAAAAATTGGATGATGTAAACTTATACCTTAACAGTATTGAGAATGCACCAATTGGTTTAGCTGGTGGCGTGTACGGTCAGCCTAAAATTTTCCGTGTCCTCAGTATTGAACAAACGGATTCGTCAGACGTTGCTCAAGGCGAAATGTTCTTGTTTAAAGGTGCCATTGTTGCCCCGATCAAGTACCAAGCCATTGACAATATTAATGACCCAAGCTTGGTTAATTTCAAATATAACAGTTTGGACTTAACCTATAAGCGTGACCGTATCCCTAGTATGCCGTTTGATGTTCGCCTGTGGCTTCGTGATTTGTCAAACGCTTTAGGTCAGCCAACTTATGGTATTACGTTTAATACGATTGACCCAGCACACAAGTACAAAATTACTTGGGTAAACAAGGAAACTGGTGAAGCGCGTGAAACCATATTGTTTGATACCGAAGGTGTGTTGGCCCCAGCTTTCCTGAGACAACCAGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8bc35a3c36dc8568405c65b7db72b75d136036f28ae7372b0c20af572be4bac9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8464
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Environmental differences impact Acinetobacter baumannii phage isolation and infectivity Alseth,E.O., Roush,C., Irby,I., Kopylov,M., Bobe,D., Nguyen,K., Xu,H., Bryksin,A.V. and Rather,P.N. 2024-07-10 — GenBank