Protein

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Genbank accession
YP_006990290.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSDSQIFLDTTLFLTLESLTFSAPPPNAVDGATYVVAANPTGAWAGHEGDVAVYVEKVWNFYTPRYGWRARVRSYEKFLWFNGTTWIDEATGEDPVNPDPDPSVKPKWYDIGVTVSDSMYANEPVVHLPILDPMYLPANMVGSQFDMADGASPAYYQFRVQRNGQNVATMTVEIGNFNASFTTTGGNPISFAAGDRMTVRAQQEAVAGMKNFGFVIRMGLV
Physico‐chemical
properties
protein length:221 AA
molecular weight: 24348,06480 Da
isoelectric point:4,58238
aromaticity:0,13122
hydropathy:-0,15656

Domains

Domains [InterPro]
IPR021251
STR
7–86
IPR021251
DC_1915
STR
62–221
DC_1915
YP_006990290.1
1 221
Architecture
STR
STR 7-221
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPN19
[NCBI] 		2923009 Uroviricota > Caudoviricetes > Casjensviridae > Chivirus SPN19 >
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006990290.1 [NCBI]
Genbank nucleotide accession
NC_019417.1 [NCBI]
CDS location
range 25738 -> 26403
strand -
CDS
ATGTCCGACTCGCAGATCTTCCTCGACACCACGCTATTCCTGACACTGGAATCACTGACCTTCTCCGCTCCGCCGCCTAACGCGGTGGACGGGGCCACCTACGTCGTCGCGGCCAACCCGACGGGGGCGTGGGCCGGACATGAAGGCGACGTGGCCGTGTACGTGGAAAAGGTCTGGAATTTTTACACGCCGCGCTACGGATGGCGCGCTCGCGTGCGTTCGTACGAGAAATTCCTGTGGTTCAATGGCACGACGTGGATTGACGAGGCGACCGGGGAAGACCCGGTCAACCCTGACCCCGACCCAAGCGTTAAGCCGAAATGGTACGACATCGGGGTGACGGTGTCGGACAGCATGTACGCGAATGAACCCGTCGTGCATTTGCCGATCCTTGACCCGATGTACCTGCCTGCCAATATGGTCGGCTCACAGTTTGACATGGCCGACGGCGCAAGCCCGGCCTATTACCAATTCCGCGTGCAGCGCAACGGCCAGAACGTCGCAACGATGACCGTGGAAATCGGAAACTTCAACGCGTCGTTTACCACTACCGGGGGCAACCCGATTTCCTTCGCGGCCGGGGATCGCATGACGGTTCGCGCGCAGCAGGAAGCCGTCGCCGGGATGAAAAACTTTGGCTTCGTAATTCGCATGGGACTGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd30a8f913306fd3b150c1bba1e1af7e4faefd458c31a9887e7ad70e96f40827
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8779
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Salmonella Bacteriophage SPN19 Shin,H., Lee,J.-H. and Ryu,S. 2011-12-15 — GenBank