Protein

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Genbank accession
YP_010050292.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MTIVNFGLRHPGAAGRVQATGRVAWIPTERKIDGSLVVLPSRVSVTLTPEASAEIEPGVYLFHEEAVGGISAYRIVPNAIEVEYASLVAVDPTTLDPEAQPEAAWYAFVESLNASNADMLASALSAQHSAELAQLSATGSQTSAAASAQLSAGSALDSQASANASANSATQAGTARDGAVSAQASAAGYASAASGYAGEAQDSADEAAVQAGLALTRAGTATDKAAEATAAVLGFGIGTVSTVGPSVPASATVTGPVGNRVLNLTLPRGATPVFSVLETTTGPETPGATGMPGQKGDTGAPGGFVASSGLASTDLNTVLTAGLYTQSTAANGTLALNYPVDIVAGQLLVTRDTVGNFTTQIFYPYNGAYSGKVFWWRRYNAAWSAWAAVGATRTDQTAGRAMYAWDNVNNRDQLIYGNTGFRDISALLAGGTGTLHLQREGNTVHLHGRSITGADTNLGIRMALNASQIQGHYPAATIRGVGHAFDNTWKIIEMLSNGELRIYSSDAVQSSLNFTLSWNTVSPWPTSLVGTAVNTIPNL
Physico‐chemical
properties
protein length:539 AA
molecular weight: 55284,62570 Da
isoelectric point:5,05091
aromaticity:0,07050
hydropathy:0,02115

Domains

Domains [InterPro]
DC_0554
STR
41–539
DC_0554
cd19958
STR
306–389
cd19958
YP_010050292.1
1 539
Architecture
STR
STR 41-539
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010050292.1
1 539
Domain Start End Length (AA) Confidence
N-terminal 1 389 389 0,8951
Central domain 390 528 140 0,0030
C-terminal 529 539 10 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-389
Central
390-528
C-terminal
529-539

Taxonomy

  Name Taxonomy ID Lineage
Phage Arthrobacter phage Nubia
[NCBI] 		2015865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010050292.1 [NCBI]
Genbank nucleotide accession
NC_054426 [NCBI]
CDS location
range 77 -> 1696
strand +
CDS
GTGACCATCGTTAATTTTGGCTTGCGTCACCCGGGAGCAGCCGGACGAGTTCAGGCTACAGGTCGAGTGGCTTGGATACCCACCGAACGCAAGATTGATGGGTCTCTCGTAGTCCTTCCGTCCCGCGTTTCGGTCACTCTGACCCCCGAAGCATCCGCCGAGATTGAACCCGGCGTTTACCTGTTCCATGAAGAGGCCGTCGGCGGCATCTCCGCTTACCGGATCGTCCCGAACGCCATTGAGGTCGAATACGCCTCTTTGGTGGCGGTTGATCCGACCACTCTGGACCCCGAGGCGCAGCCCGAAGCCGCTTGGTACGCCTTCGTGGAGTCTCTGAACGCCTCCAACGCCGACATGTTGGCCTCGGCGCTGTCCGCGCAGCACTCCGCCGAACTCGCGCAGCTCTCCGCTACCGGTTCGCAGACCTCCGCTGCAGCTTCGGCGCAGCTTTCGGCAGGATCGGCGCTGGATTCCCAAGCTTCGGCCAATGCTTCCGCAAACTCCGCGACTCAGGCCGGAACGGCTCGTGATGGGGCAGTTTCGGCCCAGGCATCCGCCGCTGGATACGCTTCGGCGGCTTCCGGATATGCCGGAGAGGCCCAGGATTCCGCCGACGAGGCGGCAGTACAGGCAGGGCTGGCCCTCACCCGGGCCGGGACGGCCACAGACAAGGCCGCAGAGGCTACCGCAGCGGTTCTGGGCTTCGGGATCGGCACGGTGTCCACCGTGGGGCCTTCCGTCCCCGCGTCTGCCACCGTGACTGGCCCTGTCGGTAACCGAGTCCTCAATCTGACCCTCCCCCGTGGCGCAACACCGGTCTTCTCGGTGCTGGAGACCACGACTGGGCCTGAAACCCCCGGTGCAACCGGTATGCCGGGGCAGAAAGGCGACACAGGTGCTCCCGGTGGATTCGTTGCATCGTCGGGCTTAGCTTCAACGGACCTCAACACTGTTTTGACGGCGGGCCTGTACACACAGAGCACGGCGGCGAACGGGACTCTAGCACTGAATTACCCGGTGGATATCGTGGCTGGGCAACTGCTCGTGACGAGGGACACCGTGGGCAACTTCACCACGCAGATTTTCTATCCGTACAATGGAGCCTACTCCGGAAAAGTTTTTTGGTGGCGTCGGTACAACGCAGCGTGGAGCGCTTGGGCGGCTGTAGGAGCCACTCGCACCGACCAGACTGCTGGTCGGGCGATGTACGCTTGGGATAACGTCAATAACCGCGATCAGCTAATTTACGGCAATACTGGATTCCGAGATATCTCGGCACTGCTGGCCGGTGGTACTGGAACTCTTCACCTCCAGCGTGAAGGTAATACGGTCCACCTCCACGGGCGGTCCATAACTGGTGCCGATACCAACCTCGGAATCAGAATGGCTCTGAACGCGAGCCAGATCCAGGGACATTACCCAGCAGCCACGATTCGCGGGGTAGGTCACGCCTTTGACAACACGTGGAAAATCATCGAAATGCTGTCGAACGGCGAACTCCGGATCTACTCCTCGGATGCGGTCCAGTCCTCGCTGAATTTCACTCTCTCGTGGAACACTGTCAGTCCTTGGCCTACCAGCCTAGTTGGTACCGCAGTCAATACCATACCGAACCTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3f934149172ce91625199a29e9c8b86be12ddad8786ce94b990c28f124ced911
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7760
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50