Protein

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Genbank accession
UUW39690.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MATEPTNPIVVIADSDVNLPSTQQPNKSEPSSTLQTTGFDKDQIVTAENLNYIFNNFADWLTYLKLTDEELEPRVNTLEGRNLTAGNGLTGGGDLSLDRTFTLGTPTSLDGSTSNGVTTDSHTHELNMASKAEAQTGTDNTKLVTPLRVHEAVPYTFSPSTVVSAIESVTLPNGKILKEGTSPSILANNTYNVVFQNSFPNQCTNIQLTIGRASAVDGNLSVYYTGKSSTGFTIILDPTTGAESDSAIVDWAATGY
Physico‐chemical
properties
protein length:256 AA
molecular weight: 27247,63310 Da
isoelectric point:4,37060
aromaticity:0,06641
hydropathy:-0,29961

Domains

Domains [InterPro]
DC_0413
STR
1–253
DC_0413
G3DSA:2.60.40.3940
RBD
167–256
G3DSA:2.60.40.3940
IPR054075
RBD
171–256
IPR054075
UUW39690.1
1 256
Architecture
STR
STR 1-256
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPMCC14
[NCBI] 		2968382 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UUW39690.1 [NCBI]
Genbank nucleotide accession
ON922990 [NCBI]
CDS location
range 890 -> 1660
strand -
CDS
ATGGCAACAGAACCTACAAATCCGATTGTAGTTATTGCAGATTCGGATGTTAATTTACCAAGTACACAACAACCTAATAAATCAGAGCCAAGCTCAACCCTACAAACTACTGGTTTTGATAAAGATCAGATAGTAACAGCAGAAAACTTGAATTATATTTTTAATAATTTTGCAGATTGGTTGACCTATTTAAAACTTACTGATGAAGAATTAGAACCAAGAGTAAATACGCTTGAAGGTAGGAATCTTACAGCAGGAAACGGTCTAACAGGTGGTGGTGATTTATCTTTAGATCGTACATTTACATTAGGGACACCAACTTCGCTGGATGGAAGCACTTCTAACGGAGTCACAACAGATTCTCACACTCACGAATTGAATATGGCTTCCAAAGCTGAAGCTCAAACTGGTACAGATAATACTAAACTTGTGACGCCGTTACGAGTACATGAAGCTGTACCTTATACATTTTCACCGTCAACTGTTGTATCGGCAATTGAAAGTGTAACCCTACCAAATGGTAAGATACTAAAAGAGGGAACTTCCCCAAGTATATTAGCAAACAATACCTATAATGTTGTTTTTCAGAACTCTTTCCCAAATCAATGTACAAATATACAATTGACAATCGGAAGGGCTTCAGCAGTAGACGGTAATCTCTCAGTGTACTATACAGGTAAATCTTCTACAGGGTTCACTATTATACTAGATCCAACTACAGGAGCAGAATCAGATTCAGCTATCGTAGATTGGGCAGCAACTGGGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c3a95f7ad4e9df599807fa831d4848f8eaa8817eb8c5abe3723a8a53d9e7b1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7578
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Nucleotide Sequence of Vibrio phage VPMCC14 Kar,P. and Ghosh,K. 2023-12-03 — GenBank