Protein

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Genbank accession
YP_010302895.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MVTKVDLRMLRSDSDGEVVSEQQGLVIRPLSSDILDGVFDRNNGQLSINIPNIGKLVINGLPTINDIGYGPAGVPGRDGSDGLNGLFGRDGQRGSDGCPGSRGTEGAQGKQGVIGFRGPPGPTGQTGATGATGAAGKLEVYIQSSDPAIDNEVSPGALWIRD
Physico‐chemical
properties
protein length:162 AA
molecular weight: 16571,18110 Da
isoelectric point:4,67185
aromaticity:0,03704
hydropathy:-0,34691

Domains

Domains [InterPro]
DC_0479
ATT
2–69
DC_0479 PTHR24637
IPR008160
STR
82–137
IPR008160
YP_010302895.1
1 162
Architecture
ATT
STR
ATT 2-69 | STR 82-137 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_5
[NCBI] 		2797313 Uroviricota > Caudoviricetes > Rivsvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010302895.1 [NCBI]
Genbank nucleotide accession
NC_061450.1 [NCBI]
CDS location
range 68411 -> 68899
strand -
CDS
ATGGTTACTAAAGTTGATTTAAGAATGCTGCGCTCTGACTCTGATGGTGAAGTAGTATCAGAGCAACAGGGCCTAGTAATTCGTCCTCTGTCTAGCGATATCCTTGATGGTGTGTTTGATAGAAACAACGGACAGCTCAGCATCAATATCCCCAACATAGGTAAGCTGGTCATCAACGGACTGCCTACTATTAACGATATCGGATATGGTCCTGCTGGTGTTCCTGGACGTGATGGTAGTGATGGTCTCAACGGACTGTTTGGTCGCGATGGGCAGCGGGGATCTGATGGCTGTCCTGGGTCTCGTGGTACCGAAGGTGCTCAGGGTAAGCAGGGTGTTATCGGCTTTCGTGGGCCTCCAGGTCCTACAGGTCAAACGGGTGCTACTGGTGCTACAGGTGCTGCTGGTAAGTTGGAAGTTTACATTCAGTCGTCCGACCCTGCCATCGACAACGAAGTTTCTCCTGGGGCGCTGTGGATCAGGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f73e0d973a37768207499270d2ef6d3e131ffcb2d7488f746f96649c63446b53
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7171
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_5 Kim,S.G., Lee,S.B., Kwon,J. and Park,S.C. 2021-01-07 — GenBank