Protein

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Genbank accession
ASV42957.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,51
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSGTRAPKTIVVYDITGQTDYTIPFEYLARKFVVVTLIGQDRKVLTLNTDYRFTTKTTIGLSDPNPVGYNKIEIRRFTSATDRLVDFHDGSILRAYDLNLSQIQTLHVAEEARDLAGDSIAVDDNGDLDARGRKIVNLADAEDDTDAVNYGMLKKFDNSTFNNAQKAEASANAAKSSENKAKDSELRSIEAEAKCLASAGTAMTAAADANRSKVAAEDAEQVVVPLVPIVEKASKDAAKAAADAAQAVQDVKDLGAVPVGTIATFIKTPPAGYLKCDGSTFSQTEYPELYAYLGTNVLPNFNDRYLKQPSDEVNINQGFNAQMPDHWHDVTEHTHTRGNMEITGEFRNVNNSGTWHEMTYTSGAFHSGAPEPNCAFVQSLTPSYTGLTMAYFNASRTWTGNTSASLIKTEGINRSSLSIAIGQALEVKHHTVIFAIKAAGKVSDEGLMEVTQIKADVSDLTTRVETLEEWPQSGSNERGTWVKHQDGRMECHYQAILGFQDYTEVSGALYKGPNHFWTFPEEFIATPTVHIMGNNASNAWLFCSSAFPSTTAVTYSVFSVVRDSNIQTTIGLAAFGRWK
Physico‐chemical
properties
protein length:579 AA
molecular weight: 63237,66700 Da
isoelectric point:5,22682
aromaticity:0,08808
hydropathy:-0,34076

Domains

Domains [InterPro]
DC_0264
STR
2–576
DC_0264
IPR005604
ATT
7–130
IPR005604 SSF88874
IPR037053
ATT
255–307
IPR037053
IPR011083
ATT
260–296
IPR011083
ASV42957.1
1 579
Architecture
ATT
STR
ATT
STR
ATT 2-130 | STR 131-254 | ATT 255-307 | STR 308-576 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF31
[NCBI] 		1983608 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASV42957.1 [NCBI]
Genbank nucleotide accession
KY883645.1 [NCBI]
CDS location
range 11076 -> 12815
strand -
CDS
ATGTCAGGCACTCGTGCTCCTAAGACTATTGTGGTTTATGATATCACAGGTCAAACAGACTATACGATTCCATTCGAGTACCTTGCTCGTAAGTTCGTAGTGGTCACTCTTATTGGTCAAGACCGTAAGGTTCTGACTTTAAATACCGACTATCGGTTTACTACAAAGACAACTATCGGTTTATCAGACCCAAATCCAGTAGGTTACAATAAGATTGAGATTCGTCGATTCACTTCAGCTACTGACCGTCTGGTAGATTTCCATGATGGTTCTATTCTTCGTGCTTACGATTTGAACCTCTCACAGATTCAAACTCTTCATGTTGCTGAAGAAGCTCGTGACCTTGCAGGTGACTCTATTGCTGTTGATGATAACGGAGACTTAGATGCTCGTGGTCGTAAGATTGTTAACCTTGCAGATGCAGAGGATGATACCGATGCAGTGAACTATGGGATGTTGAAGAAGTTCGATAATTCTACTTTCAACAATGCTCAAAAAGCTGAAGCTTCTGCTAATGCTGCTAAATCTTCTGAGAACAAAGCTAAAGACTCAGAGTTACGCTCTATCGAAGCTGAGGCAAAGTGTCTTGCATCTGCTGGTACAGCTATGACTGCTGCTGCTGATGCTAATCGTTCTAAAGTGGCTGCTGAAGATGCTGAACAAGTAGTCGTGCCGTTGGTTCCAATCGTAGAGAAAGCCTCTAAGGACGCTGCTAAAGCTGCTGCTGATGCTGCTCAAGCGGTACAGGATGTTAAAGACCTTGGTGCTGTGCCTGTTGGTACAATCGCTACGTTCATTAAAACGCCTCCTGCTGGTTACTTGAAGTGTGATGGTTCTACCTTCTCACAAACTGAATACCCTGAACTTTATGCTTACTTAGGGACTAACGTTCTACCTAACTTTAATGACCGCTATTTGAAACAGCCTTCTGATGAAGTAAACATTAACCAAGGGTTTAACGCTCAGATGCCTGACCACTGGCATGATGTTACAGAGCATACTCATACTCGTGGTAACATGGAGATTACTGGTGAATTTCGTAATGTGAATAACTCAGGTACTTGGCATGAAATGACATATACCAGTGGTGCTTTCCATTCTGGTGCTCCTGAGCCTAACTGTGCTTTCGTACAAAGTCTCACACCTTCATATACAGGTTTAACAATGGCTTACTTCAATGCTTCTCGTACTTGGACAGGTAATACCTCTGCTTCTTTGATTAAGACAGAAGGAATCAATCGGTCTTCCCTAAGTATCGCTATTGGACAGGCTCTGGAAGTTAAACACCATACGGTTATCTTTGCGATTAAAGCCGCTGGTAAGGTTTCTGATGAAGGTCTGATGGAAGTCACTCAGATTAAAGCTGATGTGTCGGATTTAACTACTCGTGTGGAAACTCTTGAAGAATGGCCTCAAAGTGGTTCTAATGAAAGAGGTACTTGGGTAAAACATCAAGATGGTCGTATGGAATGTCATTATCAAGCTATTCTTGGTTTTCAAGATTATACAGAGGTAAGTGGAGCTTTATATAAAGGTCCTAACCACTTTTGGACATTTCCTGAAGAGTTCATTGCTACACCTACGGTGCATATCATGGGTAACAACGCATCGAATGCTTGGTTATTCTGTTCTTCTGCCTTTCCATCAACTACAGCAGTAACTTATAGTGTTTTCTCAGTGGTTAGAGACTCTAATATTCAAACCACAATCGGATTAGCTGCATTTGGACGTTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab042ebb8e95c4db38b66f00eab1239297603b7d0b4170085fbc9610f6761f3b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7305
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50