Protein
View in Explore- Genbank accession
- CAL4861331.1 [GenBank]
- Protein name
- tail protein
- RBP type
-
TSP
- Protein sequence
-
MILEGVYPSFLKGVSQQTPQERSDGQLGAQLNLLSDAVTGLRRRGGVKFQAELTGIPNNSYIRLIDINGVNYIMVVDTVTGTLKIYNFNGSLIKEHQTNYLKASNGKASIRSTVSRNNCFVLNTEQVIAKTPIGGTNPIPNPKTMGYISIRSGQFSKVYSVDVRVGTYTTSFEVTTDGSNASQASPEYVATQFETKLKADTTISAAYDIVREGATVALKAKSNADLNTLVIESGTGSTYIQTSNASRVQGKQDIIANLPNVLDKYIIAVGTVGNSAYYQYNATTSTWKECGVYEAPYKFTNEPIYWYFDDTDTIQVKTLDIQPRTAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTSVEELKDDDPIEVSSTALSAAQFEYAVPYNKDLVLLSQNQQAVIPANSTVLTPKTAVIYPSSKANISMSSEPQVVSRSLYYTYQRGTEYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDKKEVLVHQYLWAGEDRPLMSFHKWELPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIVDGEGVLPAFLPEGELVAAVYSSETMRHAKVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSNSTVVDLTMTFKSTGEFEYHVSDTYGDVFNGETSAQAWSEAQLGYTRVNTVSDVKFPCGTLLNSTEFSIRTTGTTELNIISASYNIRVPNRGRRHL
- Physico‐chemical
properties -
protein length: 763 AA molecular weight: 84237,48170 Da isoelectric point: 4,98969 aromaticity: 0,10223 hydropathy: -0,22752
Domains
Domains [InterPro]
DC_0058
STR
1–763
STR
1–763
IPR058003
TTP
7–761
TTP
7–761
1
763
Architecture
STR 1-763
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
763
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 137 | 137 | 0,9901 |
| Central domain | 138 | 338 | 202 | 0,1229 |
| C-terminal | 339 | 763 | 424 | 0,2190 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-137
1-137
Central
138-338
138-338
C-terminal
339-763
339-763
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAL4861331.1
[NCBI]
Genbank nucleotide accession
OZ075095
[NCBI]
CDS location
range 4989 -> 7280
strand +
strand +
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAGTGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACTGGTTTACGTAGACGTGGTGGGGTTAAATTCCAAGCCGAGTTGACAGGTATTCCTAACAATAGCTATATACGGTTAATTGACATCAATGGTGTTAATTATATTATGGTTGTAGATACTGTTACAGGTACTTTAAAGATTTATAATTTTAATGGATCTTTAATTAAGGAACATCAAACAAACTACCTTAAAGCTTCTAATGGTAAGGCAAGTATCCGTAGTACGGTATCTCGTAATAATTGCTTTGTATTAAACACGGAACAAGTTATTGCTAAGACACCTATAGGCGGTACAAATCCAATACCTAATCCTAAGACTATGGGTTATATCAGTATTCGTTCTGGTCAGTTCTCTAAAGTGTATTCAGTAGACGTGCGTGTAGGTACTTACACTACATCATTCGAAGTAACTACTGACGGTAGTAATGCATCGCAAGCTTCACCTGAATATGTGGCTACACAGTTCGAAACCAAACTTAAAGCCGATACTACTATAAGTGCAGCTTACGATATTGTACGTGAAGGTGCAACTGTAGCCTTAAAAGCAAAATCTAATGCAGACCTGAATACGCTAGTTATAGAGTCAGGTACGGGTAGTACTTATATCCAGACAAGTAATGCTAGTCGTGTACAAGGTAAACAAGATATCATTGCAAATTTACCAAACGTGTTGGACAAATACATTATTGCGGTAGGTACGGTAGGTAACTCTGCGTACTATCAGTATAATGCTACAACAAGTACTTGGAAAGAGTGTGGTGTTTATGAAGCACCTTATAAATTCACTAATGAACCTATTTACTGGTACTTTGATGACACAGATACTATCCAAGTTAAGACCTTAGATATACAACCACGTACAGCAGGTGATGATGATAATAACCCATTACCTAAGTTCGTGGATTTTGGTATTACAGGAATTAGTGCATATCAGTCACGTTTAGTGCTGCTTAGTGGCTCTTACGTTAATATGAGTGCTACAGCAGACTTTAATGTGTACATGCGTACATCCGTTGAGGAGTTAAAAGATGACGACCCTATTGAAGTGTCTAGTACTGCTCTAAGCGCTGCACAGTTTGAATATGCTGTTCCTTATAATAAAGATTTAGTTTTATTATCACAGAACCAACAAGCTGTTATCCCAGCCAATAGTACAGTGCTAACACCTAAAACAGCAGTTATCTATCCAAGTTCAAAAGCTAACATTAGTATGTCCAGTGAACCACAGGTTGTATCTCGTAGTTTGTACTACACTTATCAACGTGGTACAGAATATTATCAAGTTGGTGAGATGATTCCTAACGCTTATTCAGATGCACAGTACTATGCACAGAACTTAGCAGACCATATTCCATTATACGCCACAGGTGTTTGTACATCAATCACAGGCAGTACTACAGATAATATGGCTGTATTCAGTTCTGATAAGAAAGAGGTACTTGTACATCAATACCTATGGGCAGGTGAAGATCGTCCATTAATGAGCTTTCATAAATGGGAATTACCTTACGATGTATTACATGTACAATTTCTACAAGAGTATTTAGTGTTGTTTATGGATGTTGGTGATGATCTGGTGGTTGGCACTATTAACGTACAGCTAAACCAGCTAGATAATAAACCTATCCCATTCTTAGACATTTATCAATACGTAGATATTGTAGATGGTGAAGGCGTATTACCTGCGTTCTTACCAGAAGGTGAATTAGTAGCTGCGGTATATAGTTCTGAGACTATGCGTCATGCTAAGGTTCAATATGAAATAGAAGGTACTAAGATTAAGTGTCAATTCAATGGACGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACATTAACACCTCCTTTTGTTAAAGATGATAAAGGTCGAGTGGTTGCTGGAAGTAATAGTACAGTAGTTGACCTTACAATGACTTTTAAAAGTACAGGTGAGTTTGAGTACCATGTTTCTGATACTTATGGTGATGTGTTTAATGGTGAAACATCTGCACAAGCTTGGTCAGAAGCACAACTAGGGTATACGCGAGTAAATACAGTTAGTGATGTTAAGTTCCCATGTGGTACGTTATTAAATTCGACCGAGTTTAGTATTCGTACTACTGGTACAACTGAACTTAATATCATTAGTGCTAGTTATAATATCCGTGTACCAAACAGAGGACGGAGGCATTTATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
35a7c3baa6c19627668082cb592dd0d42053ee7bd2f74227f2ccdcde4553b28d
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50