Protein

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Genbank accession
XGU08437.1 [GenBank]
Protein name
straight fiber tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MISNNAPAKMVLNSIMTGYTLAYIQHSIYTDYDVIGRSFWLKIGEEVERRDYTGIDTFFVMINNLTPSSSYQVQGAFYDSIIDAELLEAKVGINLSNEANFKTKEKPTITAARSESEPVDVGVGAPIVVVETSGEASYCTIELKSTASPDSEWVKYYIGALGPTIKFGGVPVGDYKIRISGQVTMPDGVTVDSSGYSEFPNILTVAYNFVPPTAPIDIVFKAARIADGKERYDVRIEWDWERGAGANVREFLVTYINSEEYAKTGWAKAQKINVGAARAATIISFPWKVEHTFKVSSIAWGPNKQDITESAPVTFILNEDTPLDNSFVNETGIDVNYAFIKGSMKDGEIWRQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGTTLRISSGVVIGTPNGDVDIGTGLQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNKLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSLGIPGLGGWDDGQANAFFQNNFGSPPVRYDVLTEFNSNAPQSAFTRQWNGSGWVNPAMVLHGNMIVNGTVTADKIVAGNAFLSQIGVNIIYDRNAALSGNPEAYYKMKIDLNSGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74673,94230 Da
isoelectric point:4,87539
aromaticity:0,10219
hydropathy:-0,22934

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
XGU08437.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-196 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XGU08437.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 409 409 0,9065
Central domain 410 640 232 0,1351
C-terminal 641 685 44 0,7466
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-409
Central
410-640
C-terminal
641-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen_SG_WM_RUS_R2
[NCBI] 		3234146 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGU08437.1 [NCBI]
Genbank nucleotide accession
PQ002169 [NCBI]
CDS location
range 884 -> 2941
strand -
CDS
ATGATTTCGAATAATGCACCAGCCAAGATGGTCTTAAATAGTATTATGACTGGATATACTCTTGCGTATATCCAGCATTCTATCTACACCGACTACGACGTTATCGGTAGATCATTCTGGCTAAAGATTGGCGAAGAAGTTGAAAGACGCGACTATACTGGTATCGATACTTTCTTCGTTATGATTAACAATTTAACTCCCTCTTCCTCCTATCAGGTTCAGGGAGCTTTTTATGACTCAATTATTGATGCAGAACTTCTTGAAGCAAAGGTTGGTATAAATCTCTCTAATGAAGCTAACTTTAAAACAAAAGAAAAACCAACCATTACTGCTGCAAGATCAGAATCAGAACCCGTTGATGTGGGTGTTGGTGCTCCTATAGTAGTTGTAGAAACTTCAGGAGAAGCTAGCTACTGCACTATTGAATTAAAAAGCACAGCATCTCCAGATAGTGAGTGGGTTAAATATTATATAGGTGCCTTAGGCCCAACAATTAAGTTTGGTGGTGTTCCTGTAGGTGACTATAAGATTAGAATATCTGGTCAAGTTACTATGCCAGATGGAGTTACAGTAGACTCTTCTGGATACAGTGAGTTCCCTAATATTCTAACTGTAGCTTATAATTTTGTTCCTCCTACTGCACCTATCGATATTGTTTTTAAAGCTGCACGAATTGCTGATGGTAAAGAACGATATGATGTTAGAATTGAGTGGGATTGGGAACGTGGTGCGGGTGCTAACGTTCGTGAATTTTTAGTTACTTATATAAACTCCGAAGAATATGCTAAAACCGGATGGGCTAAAGCTCAAAAGATAAACGTGGGTGCTGCTAGAGCTGCAACGATTATATCATTCCCATGGAAAGTTGAACATACCTTTAAGGTTTCATCAATTGCCTGGGGACCAAATAAGCAAGATATAACAGAATCAGCTCCTGTAACATTTATATTGAATGAAGATACTCCTCTAGACAACAGCTTTGTCAATGAGACAGGTATTGATGTTAACTATGCTTTTATTAAGGGCAGTATGAAAGATGGAGAAATCTGGAGACAGACATTCTTAATTGATGCAGCTACTGGTGCTATTAACATTGGTCTGCTAGATGAAGAAGGAAAAGCACCTATTTCTTTTGACCCTATAAATCGTGTTGTTAACGTTGATGGTAAAGTAATTACTAGAGATATTAACGCTGCGAACTTTATCATGACTAACTTGTCTGGTAAAGATAATCCAGCAATTTACACTCAAGGTAAATCTTGGGGAGATAATAACTCTGGTATTTGGATGGGTATGGATAATACCTCTGCCAAAGCTAAATTAGACATTGGTAATGCTACACAATGGATACGTTATGATGGTACTACTCTGCGCATCTCTAGTGGTGTAGTAATTGGAACGCCAAATGGTGACGTAGATATTGGAACTGGTTTACAAGGTAAGCAAACAGTATTTGTTTATAAGTTAGCAACATCTTTACCGGCCAAACCGCTAGAACAAGATTACCCACCTCCTGGTTGGTCAAAAACTCCACCTAACCGTACAGATATGACACAAAATATCTATGCGACTACGGGTACACTTGATCCAGTTACTAACAAACTTCTTGAAGGTACTAGCTGGTCTGATGTAGTTCAGTGGAGTGGTACTGAAGGTACTATAGGACATGATGGACAACGTGGTCCTGGAATGTACTCCTTAGGTATTCCGGGTCTTGGAGGCTGGGATGATGGGCAGGCTAATGCCTTCTTCCAGAATAACTTTGGTAGTCCTCCTGTTAGATATGATGTATTAACCGAATTTAATAGTAATGCTCCACAATCAGCATTTACCAGACAATGGAATGGATCTGGGTGGGTTAACCCTGCAATGGTTCTTCATGGGAACATGATTGTTAATGGGACGGTGACGGCGGATAAAATTGTAGCAGGAAATGCTTTCTTGTCTCAAATTGGTGTTAATATCATTTATGATAGAAATGCTGCGTTATCCGGGAATCCTGAGGCATACTACAAGATGAAGATAGACCTAAATAGTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
203fcd65d605002eac5ab2db327ab7feffd6bc08ce6cec3615f1a7e8bb6bbe49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7882
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50