Protein

View in Explore

Genbank accession

UVD32192.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Protein sequence

MANDNDWGDDFLDGDFDFDYDFDGNKDQGFLKSVSKGFFSSLKSNTVGDTDAKIKTLRRILPSSFGTTFNFYRDLDRRKKEAFKEFKENSTELMGDLAFLSGSLSESLRDRLPNKIVDGMEEFSKKDFSDWEKQGEVREEELSMEAVTEDMEKQMLDALEQQSFVTVESTDTMTRVMNSIGSKQLSAGLQNNEQLFEVNANLKRLYDYQMKIQGQREAMKLNLMTRQYLTSAKYFKFMEASQHRMIREMKAITANTGLSDYEKTSLLQATKGRMRDNILATTMSRTGGFGDALGQIISKDGVNDGIGMLGSLVGDLRFAREMTDGVGINTGEMIGSMLGQYVVEKGPQFLDTKAGKKMLNKLRLKFPEEAKKFDEVKKTVTEFGDTLSYSTRALGSVMGRHYQETGMMDLPDQTYEEYLEELDPNAKPMPKVLWTTIRKATQAAGGAFNLIGENYQESQGSFYEIKEKSLAGLKDNSVWSVHDSRSLTEEIPTLLSEIHHSIEKMRTGEDDAAKLRYDYRTSRVTTQDHLNKQIENIVTPTWELSSYADSAKSIAKELDKDGTLSDSALEALALRLARESDKGNIFNPYDYLSMSTDEYLNEDHAKEIDELIRSRFQLTQADLERTQDNSLDGLMARLVVPTAEGKELLHRLSERTESLKNYTPDVSKKIDLVRSLGLDEGLKSSGYIKVDEKTNKEYVNQELIWKQLSDQLAGKNVKQPLPNAMPDYLTDSKDILGGRSRFTPTPLVNSQTPLSFSDEVSSLLSSPLPVQEEVSDALSNIINTLVKIQTNTENLSVLDTREKGEIKLDPVLELLTATNTSLATINDTQLQQLTVLKKLKSVSTVGTTDLEGEELTQEKQQEEKDKQSLLERLRSIAPVDVFNKGVESLIANKPMVLGGLIGGLGVTAMSNPKAAALLAGGAAVATLYGKLNKMSNAGNTPGEDEDIYDEEGNEVLYAAKKNAGNYYDQASKKVIKSWKDIKGTIIDLSQGGSSIAASAKRLGGKLFGPDGREVMLDGLHQLQAFASKIYQKIDPLNHAKKLMDSVKTEADQLNVYLKGESDPVLTRRGFKNGWYFDAEGNEIKGWRDIKGPVYDQDGEELISTEDLNNGLTTIGGVALTQLEGAGKAFGKFVSKGAGWLQTNGRERLGSAILGKDSTITKVGVDKYEPITERLDSIYALMAKQWNADPNMPLSEKASPKVKAYMDSVASSADEDADVQPEKSGFRLNSLADKIRRKKEAKKAKFQDSVIDIAESLQPNDKNGKPKKDGGILGSLLGLAGGGLATLLQKFLSIGVTGFKTMVGLGGTITKGLVSLGKVLGSALLGRKTTDALGDMADGMDGSGNRRNKKGGKRGRFPKLGKMSGMTKLGLGAGLMIGGDMALGAVRDSLDPEEGSVTDKLLDYGSVGLDVAGMGMTASAVAGMAGTSLGGIAAAAAPFLLNPVTLGIAGVGLAGYAAYKYFSSSDLSVQQKLRMAQYGIDAQHEELINDVLKLEKQLENYVLLKEKEASFADSTPFNKILSPFFASRKTEQGLQDGVTWFGKRFKPIFLMYQAAMKTLHCRNFEQYDTADTLNLAVVAKDVHNDVIALNPPPYRIQVWINADVYALDYSDTLAQINRYFEELKKTTDKTNVFTKLPDDLMIRDTKTQIKENEKKGMLETAWDKLTGNYVDQEKQDKLDTWFKQPEVIKGIDVSDMLPGDKPVALITAYRLAAYGNDENMPWRVEAVLKLERWMEKRMTYASGKAEYNDTDEAFWKAFAMTFRITSKKGRELALRWFNYRFLPVYTVWFETCREQRGGDPSKVWRTLSATAQMRFSQRVNELSVLIDEKVRSVFNVDEAPFEGELSTGANTRIKRMLIALEGKANEAKLRDPDFERQTTAPSKRDNSIYAPTPGTMTADPNAKPDFQELRSGNVNTKTGQSNRPQTNASGNGPQDLLSRDLKEVSVDTTRKIENDVTMKPGDDKGVSLNKDQIVQTLIQEMVKQGYDDPRQIAEMLALTDYETGGFRNTAENMRYTNASRARSIFRKLKKYNIPQIQEIIRQGPVAFANAVYNGWLGNTDSPNDGWLYRGRGLVQLTGKDNYERAGADLGLDIVNNPKMVSEDPETMAKTAIWFFKNSKQMQSIKEHGDFTYAARGLNGGKALPGMDKREGLYKQYLEGLLTGDLTKDLKPEDGGDTQVAEAEDQPYSIIDGPVETSKGLVNDRVDPRVRRKLEAKRAKYANSLANSGDQARLKLEERMATMPKPDTAPTLEDTAAQATAAVKETKVMDKVAQAQKTSTKSIFKEEPPVPSVVKEAVAPVVQVQPTPPSEVTMKPETEAAIGAQSQILAQILNAINEGNQNAKRDRQIGVNAF

Physico‐chemical properties

protein length:	2352 AA
molecular weight:	260293,35370 Da
isoelectric point:	5,54018
aromaticity:	0,07100
hydropathy:	-0,54362

Domains

Domains [InterPro]

DC_0124
STR
1–2139

DC_0124 DC_1114

Coil
Unmapped
852–872

Coil Coil G3DSA:1.10.530.10

IPR023346
STR
1980–2157

IPR023346

PTHR22595
Unmapped
1988–2159

PTHR22595

IPR000726
ENZ
2064–2119

IPR000726

UVD32192.1

1 2352

Architecture

STR

RBD

STR 1-2157 | RBD 2158-2352

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0124	STR	DC_0124	1	2139	Novel HMM	DC_0124	Central	Low	Positional only	152 proteins / 152 hits
Coil	Unmapped	-	852	872	Coils	Coil	-	-	-	-
Coil	Unmapped	-	1483	1503	Coils	Coil	-	-	-	-
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	1968	2159	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR023346	STR	IPR023346	1980	2157	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
PTHR22595	Unmapped	-	1988	2159	PANTHER	CHITINASE-RELATED	-	-	-	-
IPR000726	ENZ	DC_0328	2064	2119	InterPro cluster	Glycoside hydrolase, family 19, catalytic	C-terminal	High	Text match	27 proteins / 27 hits
DC_1114	RBD	DC_1114	2160	2352	Novel HMM	DC_1114	C-terminal	Low	Positional only	4 proteins / 4 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Vibrio phage phiKT1028 [NCBI]	2972441	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Vibrio parahaemolyticus [NCBI]	670	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Genbank protein accession

UVD32192.1 [NCBI]

Genbank nucleotide accession

OP123707.1 [NCBI]

CDS location

range 122580 -> 129638
strand -

CDS

ATGGCTAATGATAATGATTGGGGAGATGATTTCTTAGATGGCGATTTCGATTTTGACTATGACTTTGATGGAAACAAAGATCAAGGTTTCTTGAAATCCGTCTCTAAAGGTTTCTTCTCTTCCTTAAAATCTAATACCGTCGGCGATACCGACGCCAAGATTAAAACATTACGACGAATATTACCTAGTTCATTCGGTACAACCTTCAACTTCTACCGAGACCTAGATCGTCGTAAAAAAGAAGCGTTTAAAGAGTTCAAAGAGAACAGTACCGAGTTGATGGGCGATTTGGCATTTCTGTCAGGTTCACTCAGTGAGTCCCTTCGAGACCGATTACCCAATAAAATCGTCGACGGCATGGAAGAATTCAGTAAGAAGGATTTCAGCGATTGGGAAAAACAAGGTGAGGTAAGAGAAGAAGAACTTTCCATGGAAGCCGTTACGGAAGATATGGAAAAACAAATGCTGGACGCTCTGGAACAACAAAGCTTTGTTACCGTAGAGTCCACGGACACTATGACTCGTGTCATGAACAGCATTGGTTCTAAGCAATTGTCCGCTGGGTTACAGAACAACGAACAACTCTTTGAAGTGAATGCGAATCTGAAACGTCTGTATGATTATCAGATGAAGATTCAAGGTCAACGTGAAGCCATGAAACTGAACTTAATGACTCGTCAATACTTGACCAGCGCTAAGTATTTCAAATTCATGGAAGCCTCACAACACCGCATGATTCGAGAGATGAAAGCGATCACGGCAAACACCGGACTCAGCGACTACGAGAAGACCTCGTTGCTGCAAGCCACGAAAGGACGGATGCGTGATAACATTCTGGCAACGACCATGTCTCGTACTGGCGGGTTCGGTGATGCATTAGGTCAGATCATTTCTAAAGATGGGGTGAATGACGGCATTGGGATGTTGGGGTCATTAGTTGGGGATTTGCGCTTTGCGAGAGAAATGACGGATGGCGTGGGAATCAACACTGGTGAAATGATCGGCAGCATGCTAGGGCAATACGTGGTAGAAAAAGGACCACAGTTCCTAGACACGAAAGCCGGTAAGAAAATGCTGAACAAACTGCGTTTGAAGTTCCCGGAGGAAGCGAAGAAATTCGATGAGGTGAAGAAGACCGTTACGGAATTCGGGGATACGTTGTCTTATTCAACGCGTGCTCTGGGTTCGGTTATGGGACGACATTACCAAGAAACGGGGATGATGGACCTACCAGACCAAACGTACGAAGAGTACTTGGAGGAACTGGATCCAAATGCTAAACCGATGCCGAAAGTTTTATGGACGACCATCCGTAAAGCAACCCAAGCCGCCGGCGGTGCGTTTAACTTAATCGGTGAAAACTACCAAGAGTCTCAAGGTAGTTTCTACGAGATCAAAGAGAAGTCTTTAGCAGGACTGAAAGACAACTCAGTATGGTCAGTTCATGATTCACGATCGTTAACGGAAGAGATCCCTACGTTACTAAGTGAGATTCATCACTCCATCGAGAAAATGCGTACCGGAGAAGATGATGCGGCGAAGCTGCGTTACGATTACCGTACGTCAAGAGTGACGACACAAGACCACCTTAACAAGCAGATCGAAAACATCGTGACGCCGACGTGGGAACTCAGTTCTTACGCCGATAGTGCGAAGTCTATTGCGAAAGAGTTAGATAAAGATGGCACCCTATCCGATTCAGCTCTGGAAGCGTTAGCGCTCCGCTTAGCTCGTGAGTCAGACAAAGGGAATATCTTTAACCCTTACGACTATCTCTCTATGAGTACCGATGAGTACCTCAATGAAGATCACGCAAAAGAAATCGATGAATTGATTCGTTCTCGTTTCCAACTTACCCAAGCGGATTTGGAACGCACGCAGGACAACTCACTCGATGGCCTGATGGCTCGTCTAGTGGTGCCTACGGCAGAAGGGAAAGAGTTACTGCATCGTTTATCTGAACGTACGGAATCGTTAAAGAACTACACCCCAGACGTTTCTAAGAAGATCGACCTGGTTCGTAGTTTAGGATTGGATGAAGGATTGAAATCATCGGGTTATATTAAAGTCGATGAGAAAACCAATAAAGAGTACGTTAACCAAGAACTTATTTGGAAACAACTCAGTGACCAATTAGCAGGTAAGAATGTTAAACAACCTTTACCTAATGCCATGCCTGACTATCTTACTGATAGTAAAGACATATTAGGAGGTCGTAGTCGTTTCACTCCTACTCCACTTGTTAATAGTCAAACTCCCCTATCCTTTTCCGACGAGGTTTCCAGTCTTCTTTCCTCCCCCCTTCCTGTTCAGGAAGAAGTTAGTGATGCTCTCAGCAATATCATTAATACGCTAGTTAAAATTCAAACCAACACCGAAAACCTCAGTGTGTTGGATACCCGTGAGAAAGGAGAGATTAAACTCGATCCCGTATTAGAGTTGTTAACCGCAACCAATACCTCACTCGCTACGATCAATGACACTCAGTTGCAACAACTGACGGTCCTAAAGAAACTGAAATCCGTTTCGACGGTAGGGACCACTGACTTAGAGGGTGAAGAACTCACCCAAGAGAAACAACAGGAAGAGAAAGACAAGCAATCGTTGTTAGAGCGCTTACGATCAATCGCGCCTGTGGACGTTTTCAATAAGGGAGTGGAATCGTTAATCGCAAATAAACCTATGGTGTTGGGCGGTTTGATTGGTGGACTTGGTGTCACAGCCATGTCGAATCCAAAAGCAGCAGCCCTGTTAGCCGGTGGTGCAGCGGTCGCGACGTTATACGGTAAACTCAACAAAATGAGTAATGCCGGTAATACCCCTGGGGAAGACGAAGACATCTACGATGAAGAAGGGAATGAAGTCCTGTACGCTGCTAAGAAGAATGCGGGCAACTACTATGACCAAGCTTCGAAGAAGGTGATCAAATCTTGGAAAGACATCAAAGGGACGATCATTGATTTGTCTCAAGGTGGATCTTCCATTGCAGCATCCGCTAAACGTTTAGGTGGGAAGTTATTTGGTCCAGATGGCCGTGAGGTAATGCTGGATGGACTTCATCAACTGCAAGCGTTTGCCTCGAAGATCTATCAGAAGATCGACCCACTGAACCACGCTAAGAAACTGATGGACTCGGTGAAGACCGAAGCCGATCAACTGAACGTTTACCTGAAAGGGGAATCGGATCCTGTCTTAACTCGTCGTGGGTTTAAGAACGGTTGGTACTTTGATGCGGAAGGTAACGAGATCAAAGGTTGGCGTGACATCAAAGGTCCAGTGTACGATCAAGACGGTGAAGAGTTAATCTCGACAGAAGACTTGAACAATGGACTGACCACGATTGGTGGAGTGGCGTTAACCCAACTGGAAGGCGCTGGTAAAGCGTTTGGCAAGTTCGTAAGCAAAGGTGCCGGTTGGTTGCAAACTAACGGTCGTGAACGCTTAGGGAGCGCGATACTGGGGAAAGACTCCACCATAACGAAAGTAGGGGTGGATAAGTACGAACCAATCACTGAACGCTTGGATTCCATTTATGCGTTGATGGCGAAACAGTGGAACGCCGATCCAAACATGCCGTTGTCAGAAAAAGCCTCACCTAAGGTGAAAGCTTACATGGACTCAGTAGCCAGCAGTGCAGATGAAGACGCGGACGTCCAGCCAGAGAAATCAGGTTTCCGTTTGAACTCATTAGCGGACAAAATCCGTCGTAAGAAAGAAGCGAAGAAAGCTAAGTTCCAAGACTCGGTGATCGATATCGCAGAAAGCTTACAACCAAATGACAAAAATGGTAAACCAAAGAAAGACGGCGGCATCTTAGGCAGTCTCTTAGGTTTAGCTGGCGGTGGTTTGGCGACGTTACTTCAGAAGTTCTTGAGCATCGGTGTAACGGGTTTCAAAACCATGGTAGGTCTGGGTGGGACTATCACTAAAGGTTTGGTCTCATTGGGTAAAGTCTTGGGTAGTGCGTTGTTGGGTCGGAAGACTACTGATGCACTCGGAGACATGGCTGATGGCATGGACGGGTCTGGTAATCGTCGTAATAAGAAAGGCGGTAAACGTGGACGTTTCCCTAAACTGGGTAAGATGAGTGGCATGACCAAACTTGGTTTGGGTGCTGGTCTAATGATCGGTGGGGATATGGCGTTAGGAGCCGTCAGAGACTCTCTAGACCCAGAAGAAGGATCAGTGACAGATAAACTACTGGATTACGGTTCGGTAGGCTTAGACGTGGCTGGGATGGGGATGACAGCTTCAGCAGTCGCTGGGATGGCGGGAACGTCATTAGGCGGGATTGCAGCCGCTGCTGCTCCATTCTTGTTGAATCCGGTTACGTTAGGTATTGCAGGAGTAGGGCTAGCGGGTTACGCGGCGTACAAATACTTCAGCTCCAGCGATTTGTCTGTTCAACAGAAACTTCGTATGGCACAGTACGGTATTGACGCTCAACACGAAGAACTCATTAACGACGTCCTTAAACTGGAAAAGCAGTTAGAGAACTACGTGCTCCTTAAAGAGAAAGAAGCGAGCTTTGCTGACTCCACTCCATTCAACAAAATCTTGTCTCCGTTCTTTGCGTCTCGTAAGACTGAACAAGGATTGCAAGATGGCGTAACGTGGTTTGGCAAACGTTTCAAGCCGATCTTCTTGATGTACCAAGCGGCCATGAAAACTCTGCATTGTCGTAACTTTGAACAGTACGATACAGCAGACACGTTGAATCTGGCTGTGGTGGCGAAAGACGTGCACAATGACGTTATAGCACTGAACCCACCACCGTACCGTATTCAAGTCTGGATTAACGCAGATGTGTATGCGTTGGATTATTCCGACACGTTAGCTCAGATTAACCGTTACTTTGAAGAATTGAAAAAGACCACCGACAAAACCAACGTCTTTACTAAGCTCCCTGACGATCTGATGATTCGTGATACGAAGACCCAGATTAAAGAGAACGAAAAGAAAGGCATGTTGGAAACCGCGTGGGACAAACTCACAGGTAACTACGTTGATCAAGAGAAACAAGACAAACTGGATACGTGGTTTAAACAACCGGAAGTGATTAAAGGCATTGACGTGTCCGACATGCTTCCAGGAGATAAACCTGTGGCCCTCATCACCGCCTATCGCTTGGCAGCGTATGGTAACGATGAGAACATGCCATGGCGTGTGGAAGCGGTGTTGAAGCTTGAACGCTGGATGGAGAAACGTATGACCTACGCCTCCGGTAAAGCCGAGTACAACGACACCGATGAAGCGTTCTGGAAAGCGTTCGCAATGACGTTCCGCATTACATCGAAGAAAGGTCGTGAGTTAGCGTTACGTTGGTTTAACTACCGTTTCCTACCGGTTTACACTGTATGGTTTGAAACGTGTCGTGAGCAACGTGGTGGTGATCCATCGAAAGTGTGGCGTACATTATCAGCAACTGCACAAATGCGTTTCTCTCAACGCGTGAATGAGCTGAGTGTGTTGATCGATGAGAAAGTCCGTTCGGTCTTCAACGTGGATGAAGCGCCGTTTGAAGGTGAATTGTCCACTGGTGCGAATACTCGCATTAAACGCATGTTGATTGCGTTAGAAGGAAAGGCGAATGAAGCGAAGCTTCGTGATCCAGATTTCGAACGTCAAACTACGGCTCCAAGCAAACGTGATAATTCGATCTATGCTCCGACCCCAGGTACCATGACTGCCGATCCAAACGCAAAACCGGATTTCCAGGAATTGCGTTCCGGTAATGTCAATACCAAGACAGGTCAGAGTAACCGTCCTCAAACCAACGCTTCCGGTAACGGTCCTCAAGATCTCCTTAGCCGAGATTTAAAAGAGGTGTCCGTCGATACTACTCGTAAGATAGAAAACGACGTTACGATGAAGCCTGGGGACGATAAAGGGGTGTCTCTCAATAAAGACCAGATCGTTCAGACCTTGATCCAGGAAATGGTGAAACAAGGTTATGACGACCCTCGTCAAATCGCAGAGATGTTGGCCTTAACGGATTACGAAACAGGTGGGTTCCGCAACACCGCAGAGAACATGCGTTATACCAATGCAAGTCGTGCTCGTTCCATCTTCCGTAAATTGAAGAAATACAATATCCCTCAAATCCAAGAAATCATTCGTCAAGGCCCAGTGGCGTTTGCCAATGCTGTGTACAATGGTTGGTTGGGGAATACGGACAGTCCGAACGACGGTTGGTTATACCGTGGTCGTGGTTTGGTGCAGCTGACGGGTAAAGACAACTATGAACGTGCAGGCGCAGACCTAGGTTTGGATATCGTTAATAATCCAAAAATGGTGTCGGAAGATCCAGAGACCATGGCGAAAACCGCCATTTGGTTCTTTAAGAACTCCAAGCAAATGCAATCGATCAAAGAACACGGTGACTTTACTTACGCAGCTCGTGGGTTGAATGGTGGTAAAGCTCTACCGGGAATGGACAAACGTGAAGGTCTTTACAAGCAATACTTGGAAGGACTATTAACGGGAGACCTGACGAAAGATCTTAAACCAGAAGACGGAGGTGATACCCAAGTCGCTGAAGCTGAAGATCAACCATACAGCATCATTGATGGTCCGGTGGAGACGTCGAAAGGTTTGGTGAACGATCGTGTGGATCCTCGAGTCCGACGTAAGTTGGAAGCGAAACGCGCGAAGTACGCCAACTCTTTAGCGAACAGCGGTGATCAAGCTCGATTGAAACTGGAAGAACGCATGGCTACCATGCCGAAACCTGATACCGCACCAACGTTAGAAGACACGGCAGCGCAAGCGACCGCCGCGGTTAAAGAAACGAAGGTGATGGATAAGGTGGCTCAAGCTCAGAAGACTTCGACCAAATCGATCTTCAAAGAAGAACCACCAGTACCAAGCGTAGTGAAAGAAGCCGTAGCTCCAGTCGTTCAAGTTCAACCAACCCCGCCTTCAGAGGTAACCATGAAGCCAGAGACAGAAGCAGCGATCGGTGCCCAATCTCAAATCTTGGCTCAAATCCTCAACGCCATTAATGAAGGAAACCAAAACGCGAAACGCGACCGTCAGATCGGCGTTAATGCGTTCTAA

Genome Context

Tertiary structure

PDB ID

9ecbd869002af3be2736c85a44e21913d524c814bc0cce12d6a754a02348dbee

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,4776

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence