Protein

View in Explore
Genbank accession
XAI70031.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MNTSVETKDQVLFIYVKNPLLPADSKVSVYNEHEPDRSLADYLGPLEGEWAVSVSGKIVEQADWKDTYLQAADCIVIAPMILGGGGGGGGKTILRMVAMIAVTYFSAGAGTAMFGAGTFGAAAVTVGLTVAGTMAINALLPPATPKTSTSGSDYDSSPTYGIDGPKNMSTRSIPVPVVYGECWFAGNFIQSYVDNVGDDQYLNLLINIGEGPIEGVSDVQLNSQPISNFTNVETWFRDGSENQTMIPYFGDIVVPVNRNAEITQGLYVTHSVTEPVDRLRIDVVMPSGVNRLDDEDGMEGFTASFQLEIREAGGLWRPFVEGAATSTIGINGRQMSALRRSYYSATLDRTKLYEIRATHNQSTTNTNISNKITLTDVNQITFDDLNYKHTALFGMRIKLSDQLSGIPSVQYRVKGRKVPVYNALTGNFVETWTANPAWIALDVLMNKRYGGQISATRIKMEYFRQWATYCDQNGLVFNGAVDQRTNLWDAIAPIAKIGRGQIIRAGTRFQVSMVRKSKPVQMFSMGNIKKGSLAIDWLSDDERANECHVTYFDKNDTGKQKSVIVPNLAARERGEESKPTEITLYGVDNVTQATREGTLAMNMQQLLKTITFEAPISAIACTLGDVVAIQHDVPDWGQGGLTDVGSTKNVLVADKPVTQPLGGTYAVRVRHDKVLQGTWEIEELIGNIVVPTGPFNITMFERFRRLFVPGTGRDYGISEPIIDQYGRHGLRLNSTAGLNVGDTIQLYDTDVVETRFVGSVSADGLRITPTQPFSAIPTVESPWAFGLNGTEVMLMTVMNISGKDDLWKTISGIEYSDSAYDDTVIDYKPDPTNTNPNIQNVTFNGFVERRYLVGAAYTSDVEMTWSSTDITYAYAEVHINIDGEGWKFMDANATFYNLVAINSGTIQLKLVPVTIEGFKPNFNNVPTYTYTVAGGVPRNPDPPLNFRVGTITNDIIELLWGDLNAWSAAQNVYAYEIWHADGQGAVLESAQLLAVTKNNHYPHVGLLKNSWHTYWIRTSNVTAKDAKSGFIPAGGLIVQCADNDPYGLIDLTDLAPSLRESINAPKVIEDLSTIIANAATKLEEAEDAQKQEVYNREQAVNDVKASVTEQVAAIADETEAMAARVSKMEATVNPATQAKIDELAQVVANGDSTLAQRIALMQVKFADDLSAAITEEQTVRATAISAIASQVTTLTSTVGENTTSLQQTMKVVDGISAQYTLRVDVNGIVSGFGLATGAGGVSEFAIMATRFKIYGPGPGDTVVKTAVFNVDTETGTAYLRNAVVGNLNSDNYVSGVSGWCLKK
Physico‐chemical
properties
protein length:1303 AA
molecular weight: 141656,95650 Da
isoelectric point:4,87198
aromaticity:0,08442
hydropathy:-0,14213

Domains

Domains [InterPro]
DC_0129
STR
1–705
DC_0129 DC_1905
IPR053171
Unmapped
194–669
IPR053171 Coil IPR015406
IPR055385
ATT
255–382
IPR055385 IPR032876
XAI70031.1
1 1303
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-254 | ATT 255-382 | STR 383-481 | ATT 482-635 | STR 636-705 | RBD 727-1303
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAI70031.1
1 1303
Domain Start End Length (AA) Confidence
N-terminal 1 106 106 0,9164
Central domain 107 305 200 0,1165
C-terminal 306 1303 997 0,0653
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-106
Central
107-305
C-terminal
306-1303

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Nican01
[NCBI] 		3138540 Uroviricota > Caudoviricetes > Nickievirus >
Host Pseudomonas syringae
[NCBI] 		317 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAI70031.1 [NCBI]
Genbank nucleotide accession
PP179318.1 [NCBI]
CDS location
range 14658 -> 18569
strand +
CDS
ATGAATACGTCGGTTGAGACCAAAGACCAGGTGCTCTTCATCTATGTGAAGAACCCTCTGCTGCCTGCTGATAGCAAGGTCAGCGTTTACAACGAGCATGAGCCTGACCGCTCGCTTGCCGATTACCTGGGTCCGCTCGAAGGCGAGTGGGCTGTTTCTGTGTCCGGCAAGATCGTTGAGCAGGCGGACTGGAAAGACACCTATCTTCAGGCGGCCGACTGTATCGTCATCGCCCCGATGATCCTGGGCGGTGGTGGAGGCGGCGGGGGTAAGACCATCCTGCGTATGGTCGCCATGATCGCAGTCACCTACTTCTCCGCTGGTGCTGGCACTGCGATGTTCGGTGCCGGTACGTTCGGTGCCGCGGCAGTGACTGTGGGTCTGACCGTTGCGGGCACAATGGCGATCAACGCCCTGCTGCCGCCGGCGACCCCGAAGACTTCGACCTCTGGTTCTGACTACGACTCCAGCCCAACCTACGGCATCGACGGGCCGAAGAACATGAGCACCCGGTCTATCCCGGTGCCTGTGGTCTACGGTGAGTGCTGGTTCGCGGGGAACTTTATCCAGTCCTACGTCGATAACGTGGGCGACGACCAGTACCTGAACCTGCTGATCAACATCGGTGAAGGCCCAATCGAAGGCGTGAGCGACGTTCAGCTCAACAGCCAGCCAATCTCGAACTTCACCAACGTCGAGACCTGGTTCCGCGACGGCTCTGAAAACCAGACCATGATCCCGTACTTCGGCGACATCGTGGTGCCGGTCAACCGCAACGCTGAAATCACCCAGGGTCTGTACGTCACTCACAGCGTCACCGAGCCGGTAGACCGCCTGCGCATCGACGTTGTGATGCCAAGCGGTGTGAATCGCCTGGACGACGAAGACGGCATGGAAGGCTTCACTGCATCGTTCCAGCTCGAAATCCGTGAAGCTGGCGGTTTGTGGCGTCCATTTGTTGAGGGCGCAGCAACCTCGACCATCGGAATCAACGGTCGCCAGATGTCTGCCCTGCGTCGCAGCTACTACTCGGCCACCCTGGATCGCACCAAGCTGTACGAGATTCGTGCGACTCACAACCAGTCGACCACGAACACCAACATCAGCAACAAGATCACCCTGACTGACGTCAACCAGATCACCTTCGACGACCTGAACTACAAGCACACTGCTCTGTTCGGTATGCGGATCAAGCTGTCTGACCAGCTCAGCGGTATCCCATCGGTTCAATACCGCGTGAAGGGTCGCAAGGTGCCGGTCTACAACGCCCTGACTGGTAACTTCGTCGAGACCTGGACTGCGAACCCGGCGTGGATCGCTCTCGATGTCCTGATGAACAAGCGCTACGGCGGCCAGATCAGCGCGACCCGCATCAAGATGGAATACTTCCGTCAGTGGGCAACCTACTGTGACCAGAACGGTCTGGTGTTCAACGGCGCGGTCGACCAGCGCACCAACCTGTGGGATGCAATCGCTCCGATCGCCAAGATCGGTCGTGGCCAGATCATTCGTGCAGGCACCCGGTTCCAGGTCTCGATGGTCCGCAAGTCGAAGCCTGTCCAGATGTTCTCGATGGGCAACATCAAGAAGGGCTCCCTGGCAATCGACTGGCTGTCGGACGACGAGCGCGCCAACGAATGTCATGTGACCTACTTCGACAAGAACGACACCGGCAAACAGAAGAGCGTCATCGTTCCGAACCTGGCTGCGCGCGAGCGCGGCGAAGAAAGCAAGCCGACTGAAATCACCCTGTACGGTGTGGACAACGTGACCCAGGCGACCCGTGAGGGCACCCTGGCCATGAACATGCAGCAGTTGCTCAAGACCATCACGTTCGAGGCTCCAATCTCGGCGATCGCCTGCACCCTGGGTGATGTGGTTGCGATTCAGCATGACGTCCCGGACTGGGGTCAAGGTGGTCTGACTGACGTGGGCAGCACCAAGAACGTCCTGGTGGCCGACAAGCCTGTGACTCAGCCCCTGGGCGGGACTTACGCTGTGCGCGTGCGTCACGACAAGGTTCTGCAAGGCACCTGGGAAATCGAAGAGCTGATCGGCAACATCGTTGTGCCGACTGGCCCGTTCAACATCACCATGTTCGAGCGCTTCCGTCGCCTGTTCGTACCCGGCACCGGTCGTGACTACGGTATCTCTGAGCCAATCATCGACCAATACGGTCGTCATGGTCTGCGCCTGAACAGCACTGCTGGTCTGAACGTGGGCGACACGATTCAGCTCTACGATACCGATGTCGTTGAGACGCGCTTTGTGGGCTCTGTGAGCGCAGATGGGCTGCGAATCACCCCTACGCAACCCTTCAGTGCGATCCCGACTGTAGAGAGCCCCTGGGCGTTCGGTCTGAACGGAACCGAAGTGATGCTCATGACCGTCATGAACATCAGCGGCAAAGACGACCTGTGGAAGACCATCAGCGGTATCGAGTACAGCGACAGCGCCTACGACGACACCGTGATCGACTACAAGCCCGATCCGACCAACACCAACCCGAACATCCAGAACGTGACGTTCAACGGGTTCGTTGAGCGCCGGTACTTGGTGGGCGCTGCGTACACCTCCGACGTCGAAATGACCTGGAGCAGCACTGACATCACCTACGCCTACGCCGAAGTCCACATCAACATCGACGGCGAAGGTTGGAAGTTCATGGACGCCAACGCCACGTTCTACAACCTGGTGGCGATCAACAGCGGCACGATTCAGCTCAAGCTGGTGCCGGTGACGATCGAAGGCTTCAAGCCGAACTTCAATAACGTGCCGACCTACACGTACACCGTCGCCGGCGGCGTACCGCGGAACCCTGATCCACCCCTGAACTTCCGGGTGGGCACCATCACCAACGACATCATCGAGCTGTTGTGGGGTGACTTGAACGCCTGGTCTGCGGCGCAGAACGTCTACGCCTACGAAATCTGGCACGCTGACGGTCAAGGTGCTGTTCTGGAATCGGCTCAGTTGCTCGCTGTGACCAAGAACAACCACTACCCTCACGTCGGTCTGCTGAAGAACTCCTGGCACACCTACTGGATTCGGACCAGCAACGTCACTGCGAAGGACGCGAAGTCTGGATTCATCCCGGCCGGCGGTCTGATCGTGCAATGCGCGGACAACGACCCATACGGCTTGATCGACCTGACTGACCTGGCCCCAAGCCTGCGTGAGAGCATCAACGCGCCGAAGGTGATCGAAGACCTGTCGACCATCATCGCGAACGCTGCGACCAAACTCGAAGAGGCTGAAGACGCCCAGAAGCAGGAGGTCTACAACCGTGAGCAAGCGGTGAATGACGTCAAAGCCTCTGTGACTGAACAGGTGGCCGCAATCGCTGACGAAACCGAAGCGATGGCGGCTCGGGTCAGCAAGATGGAAGCGACTGTGAACCCGGCTACTCAAGCCAAGATCGACGAGCTGGCCCAAGTCGTCGCGAACGGTGACAGTACCCTGGCCCAGCGTATCGCTCTGATGCAGGTGAAGTTCGCTGACGACCTCAGCGCTGCGATCACCGAAGAACAGACCGTGCGCGCTACCGCGATCAGCGCAATCGCCAGCCAAGTGACCACACTGACCTCGACTGTCGGTGAGAACACCACCAGCTTGCAGCAGACCATGAAGGTGGTCGACGGTATCTCCGCTCAGTACACCCTTCGGGTAGACGTGAACGGGATCGTGAGCGGTTTCGGTCTCGCTACCGGTGCCGGCGGTGTATCCGAGTTCGCGATCATGGCCACTCGCTTCAAGATTTACGGGCCTGGCCCGGGTGACACGGTTGTGAAGACTGCGGTGTTCAACGTCGATACCGAAACTGGTACTGCATACCTCCGTAACGCGGTGGTGGGCAACTTGAACAGCGACAACTACGTGAGCGGCGTTTCGGGGTGGTGCCTAAAAAAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
44004102d3459481ec89ed8750b38e4ae380cdc3cfc47731abdd69e7b7ef8974
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7200
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50