Protein

View in Explore
Genbank accession
NP_944294.2 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MALKLSNNAVGVLAAALDPESTTLALQPGQGAAFPALSAGDWCPGTLVRSTGTVEVVRVTARSNDTFTIQRAQEGTGPQQFNPGDRFEHRLTAGALMSIVGDVDGLSAAFARIQPRVGDLKIWTGAITDIPAVHGPGWYLADGQNGTIDLRDKFIVAAGGSYAPGNTGGAATVALTVAQMPQHNHGVNDPGHGHGVSDPTHAHSVYDPGHSHGHNTAALTPSSTGGGAFQINGYAGGTINASATGIGIYGAATGISIQGAGTGISTQNAGSGTAHENRPPYYALAVIQYVGA
Physico‐chemical
properties
protein length:292 AA
molecular weight: 29465,20380 Da
isoelectric point:6,00836
aromaticity:0,06164
hydropathy:-0,09041

Domains

Domains [InterPro]
DC_0891
STR
1–292
DC_0891
cd22641
STR
122–190
cd22641
SSF88874
STR
136–285
SSF88874
NP_944294.2
1 292
Architecture
STR
STR 1-292
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_944294.2
1 292
Domain Start End Length (AA) Confidence
N-terminal 1 278 278 0,5740
Central domain 279 281 4 0,0031
C-terminal 282 292 10 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-278
Central
279-281
C-terminal
282-292

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Bcep22
[NCBI] 		2883944 Uroviricota > Caudoviricetes > Lessievirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_944294.2 [NCBI]
Genbank nucleotide accession
NC_005262.3 [NCBI]
CDS location
range 40112 -> 40990
strand +
CDS
ATGGCTCTCAAGCTCTCCAACAATGCAGTTGGCGTTCTCGCTGCTGCGCTTGATCCCGAAAGTACGACGCTCGCGCTGCAACCCGGACAGGGTGCGGCGTTTCCTGCACTTTCCGCTGGGGACTGGTGCCCTGGAACGCTGGTGCGCTCGACTGGTACTGTTGAAGTCGTGCGCGTGACCGCGCGCAGCAATGACACCTTCACCATCCAACGTGCTCAGGAGGGAACGGGGCCGCAGCAGTTCAACCCCGGCGACCGCTTCGAGCATCGGCTCACGGCCGGCGCGCTGATGTCGATCGTCGGCGACGTCGACGGCCTGTCTGCCGCGTTCGCGCGGATTCAGCCGCGCGTCGGCGACCTGAAAATCTGGACGGGGGCTATCACCGACATCCCGGCCGTGCATGGGCCGGGCTGGTATCTGGCGGACGGGCAGAACGGCACCATCGACCTGCGCGACAAGTTCATCGTCGCGGCGGGCGGCTCTTACGCGCCGGGCAACACCGGCGGTGCCGCGACCGTCGCGCTGACGGTGGCGCAGATGCCGCAGCATAATCACGGCGTCAACGACCCCGGCCACGGGCACGGCGTCAGCGACCCGACCCACGCGCATAGCGTCTACGACCCTGGACACTCGCACGGCCATAATACGGCGGCGCTGACGCCCTCGAGCACGGGCGGCGGCGCGTTCCAAATCAACGGCTATGCTGGCGGCACGATCAACGCTTCCGCTACGGGGATCGGCATCTACGGGGCTGCGACGGGCATCAGCATTCAGGGTGCGGGGACGGGCATCAGCACGCAAAATGCCGGCAGCGGCACCGCACACGAGAACCGACCACCGTACTACGCCCTCGCCGTCATCCAGTACGTGGGAGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f6a810b879e9a7ccff62082cbb95323012accd16d3c9e52705ea172d6c63a25
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8359
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of Bcep22, a bacteriophage isolated from soil samples and specific for Burkholderia cepacia genomovar III Summer,E.J., Cordova,M., Parkinson,B.C., Fuller,A.C., Kitsopoulos,K., Parks,B., Rambo,L., Rothwell,S., Mebane,L.M., Carlile,T.M., No,E.G., Gonzalez,C.M. and Young,R.F. 2022-10-20 — GenBank