Protein

View in Explore
Genbank accession
UYE98568.1 [GenBank]
Protein name
putative minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKKILGNLQVGRYASSQGRNLTTSVEGANFSTSGSLEIDSYTQDEFNKIVSVLPLSHYGSFNYIPAGVYGSYEGASDVISYRYRKLFVEDDGTLMILRPGTNGAKRGVYYSYLNNILSTTTLSTSINTNKEYKPGYFGSTYTAKYLYATDNRVTSGVAFNSSNDPYVFVSWMNGTLNDTQHTGILIPLATIVPSGTVRFVMTGNTNIYFFTEVSTGSNLSFEIRSIPISQVQAGGSYTITNYATWSTTGFYGTVTNSTELTIIPLLQSTNAADNPYMLIPAATTSANPFMTGVDIYAAQNSAGTIRLRVVGDAWCTTPLRNVRPKHTFSFLLNMTAKTATLEAGNIAPLTITDPGSGTVLNVSGSTYSTDPIPTINTQRSNYVMGYYYFDNGTTIAIGSPNQGDTLISRGNYPNATSVYDTLQVRSHPTSINYTQSNMNYQYGSPVGSNLMSMEWLPNNRYRVNSLIGSWVNSVNQYVPGATYTFDSVSFGTIQGYQPTVNRYRTTYDNDHRFFISTINGSTVTTNGGMFIENTKVSSGVTYDGDMNSTGSMSIANSLLTSFKNSQLSSSTITLDSSNVSNITLYVPQQTDCPAFALITAVTTTQTSYVKVVEVNVNTRTGTITTLTLKRLVYEDSGQFGSIAQPANYGVVQASTGLTIYDAGTFYFIGGADPYIYKTTGDSNAITFRAKVTKSTGQMDSFIPTSTYQNHVPNVGSMPFAAPGIGFGYIDYVASWADDAVRLIFRSCGTTLAQYNAWTDVGSPILLASQDVAQGFIIYFTEPTSLLLSGKSFTLPVQNIDLTTVKANPANSTFYIYAVMQEGLAKYIATETVIAESGTTAYNTFWIGTVTTNALQIETINIFKRSRLDVFGTSLEAAGSSIPVSYGLPTGSGTINW
Physico‐chemical
properties
protein length:897 AA
molecular weight: 97208,29090 Da
isoelectric point:5,66227
aromaticity:0,11706
hydropathy:-0,10502

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE98568.1
1 897
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,9721
Central domain 58 256 200 0,5549
C-terminal 257 897 640 0,6090
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-256
C-terminal
257-897

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XbC2
[NCBI] 		2978503 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE98568.1 [NCBI]
Genbank nucleotide accession
OP292654 [NCBI]
CDS location
range 76461 -> 79154
strand +
CDS
ATGGCTAAAAAAATTCTAGGAAATTTACAGGTTGGAAGATACGCTTCTTCTCAAGGGAGAAACTTAACAACTTCAGTTGAGGGAGCAAACTTTAGTACTTCAGGAAGTCTAGAGATCGATTCTTACACCCAAGATGAATTCAACAAAATAGTTAGTGTATTACCACTATCTCACTATGGTTCCTTTAACTACATTCCTGCTGGAGTTTACGGTTCTTATGAAGGTGCGAGTGATGTAATAAGCTACAGATACCGTAAACTATTCGTCGAAGATGACGGAACATTAATGATTCTACGTCCTGGTACTAATGGTGCTAAACGTGGCGTTTACTATTCATATCTGAATAATATTTTAAGTACTACAACATTATCAACATCAATCAATACAAATAAAGAATACAAACCAGGTTATTTTGGTTCAACTTATACAGCAAAGTACTTGTATGCAACTGACAATAGAGTAACTTCTGGTGTGGCGTTTAATTCATCAAATGACCCATATGTATTTGTATCATGGATGAATGGTACATTAAATGACACACAGCACACTGGTATTCTAATACCACTAGCAACAATAGTGCCGAGTGGTACAGTGCGTTTTGTAATGACTGGTAATACCAACATTTACTTCTTTACTGAAGTCAGTACTGGTTCAAATTTATCATTTGAAATTAGGTCAATTCCTATTTCTCAAGTACAAGCAGGTGGATCATATACGATTACAAATTATGCTACTTGGAGTACTACCGGTTTCTATGGTACAGTTACTAATAGTACTGAATTAACGATTATACCATTACTTCAAAGCACTAATGCTGCTGATAATCCTTATATGTTAATTCCAGCAGCAACAACCAGTGCTAATCCATTTATGACAGGTGTTGATATATACGCTGCTCAAAATAGTGCTGGAACAATTAGACTCAGAGTTGTGGGTGATGCTTGGTGTACAACACCACTTAGAAATGTACGCCCTAAACATACATTTAGTTTCTTATTGAACATGACAGCTAAGACTGCGACTCTTGAAGCTGGTAATATTGCTCCATTGACAATTACAGATCCAGGAAGTGGAACAGTACTGAATGTATCTGGTTCAACCTATTCAACAGACCCAATTCCAACTATTAATACCCAACGTTCAAACTACGTAATGGGATATTATTATTTTGATAATGGTACAACAATAGCTATTGGTTCTCCGAACCAAGGTGATACTTTAATAAGTCGTGGTAATTATCCAAATGCAACATCAGTATATGATACCTTACAGGTTCGAAGTCATCCAACAAGCATAAATTATACTCAATCAAATATGAACTATCAATATGGTTCTCCAGTTGGTTCTAATTTAATGAGTATGGAATGGTTGCCTAATAATAGATATAGAGTAAATTCTCTTATCGGTTCATGGGTTAACTCAGTTAACCAATATGTTCCTGGTGCGACATATACATTTGATTCTGTATCGTTTGGAACAATTCAAGGTTATCAACCAACAGTCAATCGTTACAGAACTACATACGATAATGACCATCGTTTCTTCATTAGCACTATAAATGGAAGTACAGTTACAACCAATGGTGGAATGTTCATTGAGAATACTAAAGTTTCATCTGGTGTAACATATGATGGTGATATGAATAGTACTGGTTCAATGAGTATTGCTAATTCTCTGTTAACATCATTTAAAAATTCACAACTGTCATCAAGTACAATTACGTTGGATTCATCAAATGTAAGTAATATTACACTGTATGTTCCACAACAAACTGACTGTCCTGCTTTTGCTTTAATTACAGCAGTTACCACAACACAAACAAGTTATGTTAAAGTGGTGGAAGTAAATGTTAATACAAGAACTGGAACCATTACAACTTTAACATTAAAGAGATTAGTGTATGAAGATTCTGGTCAATTTGGTTCAATAGCACAACCTGCTAATTATGGTGTAGTTCAAGCTAGTACTGGATTAACAATTTATGATGCTGGAACATTCTACTTCATAGGTGGTGCTGATCCATACATTTATAAAACTACGGGTGATAGTAACGCAATTACTTTTCGAGCTAAAGTGACTAAAAGTACTGGTCAAATGGATAGTTTTATTCCAACTAGTACATATCAGAATCATGTTCCTAATGTGGGTTCAATGCCTTTTGCTGCACCAGGTATTGGCTTTGGATATATTGATTATGTTGCTTCATGGGCTGATGACGCTGTTAGATTAATATTCCGTTCATGCGGTACTACACTAGCTCAATATAATGCGTGGACTGATGTTGGTTCTCCAATTCTATTAGCATCACAAGATGTTGCTCAAGGGTTTATAATTTACTTTACAGAACCAACCTCGTTGCTACTGAGTGGAAAATCGTTCACATTGCCAGTACAAAATATTGATCTGACAACAGTGAAAGCTAACCCAGCTAACAGTACTTTTTATATCTACGCAGTAATGCAAGAAGGATTAGCAAAATATATTGCTACGGAAACTGTAATTGCTGAATCAGGAACAACAGCATATAACACATTCTGGATTGGTACAGTAACAACCAATGCTCTACAAATTGAAACAATTAACATTTTTAAACGTAGTCGTTTAGATGTGTTCGGCACTTCACTAGAAGCCGCTGGTTCTTCAATCCCTGTTAGTTATGGTCTACCTACTGGTTCAGGAACAATCAACTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fe722044392bc0319186307ea521e32edfa721bac4350cf0eccef9d2c6762719
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2860
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi-Rangel,L., Villicana,C., Leon-Felix,J., Amarillas,L., Carrillo-Fasio,A. and Lightbourn-Rojas,L. 2024-07-15 — GenBank