Protein

View in Explore
Genbank accession
QPI18082.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,62
Protein sequence
MSSNTDIIELLSSEADVAIDQIIEDSKRLHVVVNGTGTEQATTEDGSLIPSVRKALLDNLYFKTPPLPWRVGSPVTVFNQLYAFNDVNGNVTWWYAPGATTATPVTMQSDPYNDNKFRVFLDKTNIADIYAPIMSPNFKGNPRVPTPAEGDASTTIPNTIWVKNAITKAIEGTLPNWQDGVFENITVHNNSILHNIRADGDITFLGTKVDAVDSEFNLKKINLVGPDAEINFLWSAGPGYRTNLTPDKIFSTEITGNKVNSDLFTAGADRSTSLTVRGNGVAMFDTVNIRQNDRQDPTQDTLNVQGITRLNNLIVEGTTVGINANVDGQDIAPNSVTSATSTTGTLTVTGDAQVGGNSTFIGDVEFLGKVKGLDTSNIEFDELTLDNMTVHEQLVVEGGATLATARIGDVVFTGSVAGIVMPPSNVDGMEIKPASVETPLTTTDTLIVNESTTTKDLHVTGVVTGIDTTTGADLKPATIVTTGDVTVGGLLTLNGEVQVNNIDGESVKTKILQVTQTATIENLSVPSTGTISGFGGVVNDEDITPNSVAVTEGLSVGGTTTVHDLNINGTVTGLSPDFGPGSNLVAGTVNATTVNADLVNAGNTKTGNITVTGRILDADGEDFALRVSPTQIGEAIKQISIQPQTITTKVNDENKGFVTTGTITADDGTVGVLTTNDITLQNGTVNGSLKVMGEILDKDGNPVAIMDIPSMIAGKDINPLNVTASGNITTTGELKGGKTTVGVLQAGNTKVGTLNTEGSVGIIGGLTVSETANFAKNVIVGQALTVTGQSTFGNVVVGGTLTDTQGNPIGSAESIAGKDINPRNVTATGPISTTGGLTGASGGVTEAWSAGSLSTVGELNAGKSTLGVTKTATLETGLVKASGLTMDTGSITVSTGGASIGKDLTVYENTTLGHVDMEFDGDRLTVVGNQRVNGNLYVTGNINGNVDISGQDINPRSVTATGDVSVAGTTSSDIGDFNSLEVGVSGGATGLRVLNSASIAGNLTVTGSVNAVIDQSQQDVVTKSLNTGNITATAVTTGTAKVNTSLDASTATVSAKSVTADKFLVKPKVVTTSTGSYVPDGTTNVYDITLAQNTRIEAPSGLITGGLSGSIILYLNQDATGGREVTFGTEFSPLNDGAVNMNPNGVTVVQLMYSGHGSVIDTLILPRT
Physico‐chemical
properties
protein length:1168 AA
molecular weight: 120317,34280 Da
isoelectric point:4,39839
aromaticity:0,04024
hydropathy:-0,04007

Domains

Domains [InterPro]
DC_0194
STR
1–716
DC_0194 DC_0092
IPR058969
ATT
14–120
IPR058969 IPR058970
QPI18082.1
1 1168
Architecture
STR
ATT
STR
STR
STR 1-13 | ATT 14-120 | STR 121-716 | STR 791-1168
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI18082.1
1 1168
Domain Start End Length (AA) Confidence
N-terminal 1 897 897 0,9525
Central domain 898 1096 200 0,3047
C-terminal 1097 1168 71 0,6138
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-897
Central
898-1096
C-terminal
1097-1168

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage POP15
[NCBI] 		2759209 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI18082.1 [NCBI]
Genbank nucleotide accession
MT560059.1 [NCBI]
CDS location
range 29184 -> 32690
strand +
CDS
GTGTCATCCAATACCGACATCATTGAGCTTTTGAGTTCTGAGGCCGACGTCGCCATTGACCAGATCATTGAAGACTCCAAACGTCTTCATGTCGTTGTCAACGGGACTGGTACAGAACAGGCAACAACCGAAGACGGGAGCCTCATCCCGTCCGTTCGTAAGGCCCTTCTCGACAACCTGTACTTCAAGACTCCGCCACTGCCTTGGCGCGTTGGTAGCCCGGTAACGGTCTTCAACCAGCTTTACGCCTTCAATGACGTAAACGGCAATGTCACTTGGTGGTATGCCCCCGGGGCCACTACCGCCACCCCTGTGACCATGCAGTCTGATCCATACAATGACAATAAGTTCCGTGTCTTCTTGGACAAGACGAACATCGCAGATATCTATGCCCCGATCATGTCCCCGAACTTCAAGGGCAACCCACGGGTTCCAACCCCGGCGGAGGGAGATGCCAGCACCACGATCCCCAACACCATCTGGGTGAAGAATGCGATCACCAAGGCGATCGAGGGAACGCTGCCTAACTGGCAGGACGGTGTATTCGAGAACATCACGGTCCATAACAACTCCATTCTCCACAACATCCGCGCCGACGGCGACATTACGTTCCTCGGTACGAAGGTTGATGCGGTTGACTCTGAGTTCAACCTGAAGAAGATTAACCTGGTGGGTCCTGACGCAGAGATTAACTTCCTGTGGTCTGCTGGTCCAGGATACCGCACAAACCTGACCCCTGACAAGATCTTCTCTACGGAGATCACCGGGAACAAGGTCAATTCTGATCTGTTTACTGCCGGGGCGGATCGTTCCACCAGCCTCACTGTTCGTGGCAATGGCGTCGCAATGTTCGACACGGTTAACATCCGTCAGAACGATCGCCAAGACCCGACTCAGGACACTCTGAACGTTCAAGGCATCACCCGCCTGAACAACCTGATTGTGGAAGGGACCACCGTAGGCATCAATGCCAATGTGGATGGTCAGGATATCGCTCCTAACAGCGTAACCTCTGCCACTTCTACCACCGGGACCCTCACAGTGACCGGGGATGCACAGGTTGGCGGAAATAGTACCTTCATCGGCGATGTTGAGTTCTTGGGCAAAGTAAAAGGCCTGGATACCTCCAACATCGAGTTTGATGAACTGACCCTCGACAACATGACTGTCCATGAACAGCTTGTCGTTGAAGGCGGAGCTACCTTGGCGACGGCCCGTATCGGGGATGTTGTCTTCACCGGGTCAGTTGCAGGGATTGTGATGCCACCATCCAACGTCGATGGTATGGAAATCAAGCCTGCGTCAGTAGAGACTCCCCTGACCACGACGGACACCTTGATCGTCAATGAGTCAACAACTACCAAGGACCTGCATGTCACTGGTGTTGTTACAGGGATCGATACTACCACAGGTGCAGACCTGAAGCCAGCAACAATTGTCACCACGGGCGATGTTACCGTCGGCGGTCTTCTGACCCTCAACGGCGAGGTGCAGGTTAACAACATCGACGGCGAGTCTGTCAAGACCAAAATCTTGCAAGTTACTCAGACCGCGACGATTGAAAATCTGTCCGTCCCTTCTACCGGGACTATCTCAGGTTTTGGTGGTGTTGTCAACGATGAAGATATCACCCCTAACAGCGTGGCAGTCACAGAAGGCTTGTCTGTTGGTGGGACAACCACCGTGCATGATCTGAACATCAACGGTACGGTGACGGGACTTAGTCCTGACTTCGGCCCGGGGTCCAACTTGGTAGCAGGGACGGTGAATGCAACCACCGTGAACGCAGACTTGGTCAATGCCGGGAATACGAAGACTGGGAACATCACAGTCACCGGGCGGATCTTGGATGCAGACGGCGAGGATTTTGCTCTTCGTGTAAGCCCGACTCAGATCGGCGAGGCTATCAAACAGATCTCCATCCAACCTCAGACGATCACGACTAAAGTGAACGATGAGAATAAAGGTTTCGTGACCACGGGGACCATTACGGCAGACGATGGTACTGTTGGTGTCTTGACAACCAACGACATTACCTTGCAAAATGGTACAGTGAACGGCTCCTTGAAAGTTATGGGTGAGATCCTGGATAAGGATGGCAACCCGGTAGCGATCATGGACATCCCGAGCATGATTGCCGGGAAGGACATTAACCCGCTGAATGTGACTGCCTCTGGCAACATCACCACCACGGGCGAGTTGAAGGGTGGCAAGACCACTGTCGGCGTCCTGCAAGCCGGGAACACCAAAGTCGGAACCCTGAACACCGAGGGTAGCGTAGGCATCATTGGTGGCCTGACCGTCTCCGAGACGGCTAACTTTGCCAAAAACGTGATCGTCGGTCAAGCACTGACAGTCACCGGGCAGTCTACCTTCGGGAACGTTGTGGTAGGCGGAACCCTGACTGATACGCAAGGCAACCCTATCGGGTCTGCTGAGTCTATCGCAGGCAAGGACATCAATCCACGCAACGTAACTGCGACCGGACCTATCTCCACCACGGGTGGATTGACAGGTGCCTCCGGCGGCGTTACCGAAGCATGGTCAGCAGGATCTCTGTCCACAGTTGGTGAACTGAACGCAGGCAAGTCTACCTTGGGTGTTACCAAAACTGCCACCTTGGAGACTGGATTGGTCAAGGCCAGCGGCCTCACTATGGATACTGGCAGCATCACGGTATCTACCGGGGGCGCAAGCATCGGTAAGGACCTGACCGTCTACGAGAACACCACTCTGGGCCATGTTGACATGGAGTTCGACGGCGACCGCCTGACGGTAGTTGGTAACCAGCGTGTCAATGGTAACCTGTACGTGACTGGAAACATCAACGGTAACGTTGACATCTCTGGTCAGGACATCAACCCACGTAGCGTCACTGCAACTGGGGACGTGTCTGTGGCAGGAACCACATCTTCTGACATCGGCGACTTCAACTCCCTTGAGGTTGGCGTATCAGGAGGTGCTACTGGACTGCGTGTCCTCAACAGCGCAAGCATTGCCGGAAACTTGACCGTTACGGGTAGTGTAAACGCAGTTATCGACCAAAGTCAACAAGATGTAGTGACAAAGAGCCTGAACACTGGTAATATTACTGCAACGGCTGTTACGACCGGAACCGCCAAGGTAAACACCTCTCTCGACGCTTCAACTGCCACTGTCTCTGCGAAGAGTGTGACAGCAGACAAGTTCCTTGTCAAGCCGAAAGTGGTGACTACGAGCACCGGATCGTATGTCCCGGACGGAACCACAAACGTTTATGATATTACTCTTGCCCAGAACACCCGTATCGAGGCCCCGAGCGGCCTGATCACTGGCGGATTGTCCGGCTCCATCATTCTGTATCTCAATCAGGATGCGACAGGCGGGCGCGAAGTCACATTCGGGACTGAGTTCTCCCCGTTGAACGATGGGGCGGTAAACATGAACCCTAACGGGGTGACTGTTGTTCAGTTGATGTACTCTGGTCACGGTAGTGTCATCGACACACTGATCCTTCCGAGAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5dfe265824a43f2cb7d05038ecf4c5499f1016cee30884aecee57dac232a926
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2771
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50