Protein

View in Explore

Genbank accession

ARB15326.1 [GenBank]

Protein name

PE-PGRS virulence associated protein

RBP type

Evidence RBPdetect2

Probability 0,86

Protein sequence

MLEGTTYGTYMLAGDGQIDGVAPNNVNVNTGGGGGGGYYGGGGNATNSSRYWGGNGGSGYINPKYTGTITGASSALAANNTDPDYVAGVGVAGVGSTTYNNPVTNGGDGQIVFTYEIPPNLVESLTTAVPVDGTVKTYIVGADGNLVLDLWGGGGGAATMLAAGGSERGGGGGYVGGTIPVTAGQIIRFYNGRGGGGGVYTSGTATALVGTGGPGGWPDGGAGGYYAGAAPSTNGILAGAGGGSSRVYIDDQLILVAGGGGGGGDGTGTRTPGGGGGLTGGNSDIPSGQNFGATQIRGGYNSNRPTDPVTTGGLFRGGAGYVSGGSNSISATSPGGGGGGGLFGGGGSGNSTIYIGGAGGSGFIFDGLTLSKTDPFRAEVIAQMTFETGGVIDDGRQREILPVDTAPTAVTTSPKYGAYCGNYPGSGHTTMTVPAFGLQNFTIEAWFSPNSLSSGVLFAYGNSGVGGFSLHYNVNTLTLRHNGDTATDLTWADTARVANVWAHYAVVRDMAGTRVYKDGRLVMTYVNSIGTSFTATQLTLANYTGAAGNSTRFTGRIDEFRATLGACRYVKPFTPSSFAAVSTSVPTLTTITQAPQGSSGTAANNGSAKYIAGRGMGALTRLTAGTAPSGGDGQISYFIATSTVSAAGPIGTVIVSGLTDAAAGAFYPLPPVGSVVVEPYSGARVNYEVTEAVGARIKVEMWGGGGGGSSANTTLTTNGGGGGGYTVIELDLVQGDRITVQTPSGGAGGVNAGSGSAINLGGYPDGGDGYRPAFTALNCGGGGSARLWAQGNLAAVAGGGGGAAYGGGAYDFPGGAGGGNLGGPGAYDGVNAPFPNGGGTQVAGGAGTANGVNGTSLQGGHGGTVSGIANNGCGGGGGYYGGGGGGAYKSGGGGSGYVNTGLPGYRTGSTTGGSGNLPAGMSSPNYVSGIGVGSNGKGGAFTNGGNGRIVISVITPTPGNASGSIGTVNVSGLNNFGLLIGVPTGPLDTIDVVVPVGVSGQPGFAEGPLTTIGVGPAETIPRAQAIVIVPINDQTSILIEPPINAPLEVPGDGIGELDTILVSPFDSTQTAGVAFDVADLPTIILTAPEGEAVEIPPVLTSGDIGTVVVTTPEATTQIIPPVETSGAIGTITVVTVTGEASWNNNVSASGDIGTITLAAPTADAVGDDLAMGDIGTITVIAPEGVALQDAAVAADIGTISVYPIEGGQPGDAVGDIPYIQVVTPGATVNASSGDDISLYADIGTIYVLQVYGQGFWISEDNYVHALPDPLIVSITAAPQASARGDVHIVQPLPTIVVTAPVPVAAGNALADAYTGDFIILVAAPVPQTELNANVNVAMPPPIVINGNDAEASLDVTVPFSDTAVFITGPEALGLGFHGADLGPPIVVTPPQGGPEISVEIFVDPGTILVEAPRFHYIPPITVLPPEGVALDAKSAEASGDLGTITIGVPTGGYQANVAINLPLPTIFVNVPQVMVFASVAVSGDIGTITLTPPAATLTTGADAAFTLPGPIVVTAPEATATAGTAAATSGALTTITLTPPEGSVSTGAAAATSGAIGTILVSPFDGSVFISYPGNASGAIGTIVVTPPAATVSNGRNPTRYHSRGGARVRVHQETRRRGGSAIQPVPLVS

Physico‐chemical properties

protein length:	1630 AA
molecular weight:	159189,34400 Da
isoelectric point:	4,34406
aromaticity:	0,06687
hydropathy:	0,14006

Domains

Domains [InterPro]

DC_0450
STR
1–134

DC_0450 G3DSA:2.60.120.200 DC_0450 DC_0450

DC_0450
STR
124–531

DC_0450 IPR055163 DC_0450

PF13385
LEC
427–561

PF13385

IPR013320
STR
431–561

IPR013320

ARB15326.1

1 1630

Architecture

STR

STR 1-562 | STR 565-1605 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0450	STR	DC_0450	1	134	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
DC_0450	STR	DC_0450	124	531	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
G3DSA:2.60.120.200	STR	G3DSA:2.60.120.200	372	562	Merged direct domain	G3DSA:2.60.120.200	Central	Low	Positional only	153 proteins / 153 hits
PF13385	LEC	DC_0004	427	561	InterPro cluster	PF13385	C-terminal	Medium	Text match	334 proteins / 417 hits
IPR013320	STR	IPR013320	431	561	Merged direct domain	Concanavalin A-like lectin/glucanase domain superfamily	Central	Low	Positional only	237 proteins / 237 hits
DC_0450	STR	DC_0450	565	996	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
IPR055163	STR	DC_0678	698	953	InterPro cluster	ALK/LTK-like, glycine-rich domain	Central	Low	Positional only	4 proteins / 4 hits
DC_0450	STR	DC_0450	959	1199	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
DC_0450	STR	DC_0450	1188	1605	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Caulobacter phage Ccr34 [NCBI]	1959739	Uroviricota > Caudoviricetes > Jeanschmidtviridae > Shapirovirus cbk >
Host	Caulobacter crescentus [NCBI]	155892	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Genbank protein accession

ARB15326.1 [NCBI]

Genbank nucleotide accession

KY555147 [NCBI]

CDS location

range 39815 -> 44707
strand +

CDS

GTGCTCGAAGGCACCACCTATGGCACCTACATGCTGGCCGGCGACGGCCAGATCGATGGCGTCGCTCCCAACAACGTCAACGTCAACACAGGCGGCGGCGGCGGCGGCGGCTATTATGGCGGCGGCGGCAACGCCACTAACTCCAGCCGCTATTGGGGCGGCAACGGTGGCTCGGGCTACATCAATCCCAAATATACCGGTACGATCACTGGCGCGTCGAGCGCGCTTGCCGCCAACAACACCGATCCTGACTATGTCGCCGGCGTCGGTGTCGCCGGTGTCGGCTCGACGACCTATAACAACCCTGTCACCAATGGCGGTGACGGTCAGATCGTCTTCACCTACGAAATCCCGCCCAATCTGGTCGAAAGCCTGACCACGGCGGTGCCGGTCGACGGAACGGTCAAGACCTACATCGTCGGCGCTGACGGTAACCTCGTGCTCGACCTGTGGGGCGGCGGCGGCGGCGCGGCGACCATGCTGGCCGCCGGCGGCAGCGAGCGCGGCGGCGGCGGCGGTTATGTGGGGGGCACCATTCCGGTCACGGCCGGACAGATCATCCGGTTCTATAATGGTCGTGGCGGCGGCGGTGGGGTCTATACCAGCGGCACGGCCACGGCCCTGGTAGGCACGGGCGGACCTGGAGGTTGGCCGGATGGTGGGGCCGGGGGCTATTATGCCGGGGCGGCGCCGTCGACCAACGGCATCCTCGCGGGCGCCGGTGGTGGCTCTTCGCGGGTCTATATCGATGACCAACTGATCCTGGTGGCCGGCGGCGGCGGCGGCGGCGGCGATGGCACCGGCACCCGCACGCCCGGCGGGGGTGGCGGCCTGACTGGTGGCAATTCGGATATTCCCTCGGGCCAAAACTTTGGTGCCACGCAGATTCGTGGCGGTTATAACAGCAACCGACCGACCGACCCGGTCACGACCGGTGGTCTCTTCCGGGGCGGCGCGGGCTACGTCTCGGGGGGCTCGAACAGCATCAGCGCCACCTCGCCCGGCGGCGGCGGCGGCGGCGGTCTGTTCGGCGGCGGCGGCTCGGGCAACTCCACGATCTACATCGGCGGCGCTGGTGGCTCGGGCTTCATCTTTGATGGCCTGACGCTCTCGAAGACCGATCCTTTCCGCGCCGAAGTCATTGCCCAGATGACCTTCGAGACGGGTGGCGTCATCGACGACGGCCGTCAGCGCGAAATTCTGCCGGTCGACACCGCGCCGACGGCGGTCACCACCTCGCCCAAGTACGGCGCCTATTGCGGTAACTATCCCGGCAGCGGTCATACCACTATGACTGTGCCGGCCTTCGGCCTGCAAAACTTCACGATCGAGGCGTGGTTCAGCCCCAACTCGCTGTCCAGCGGCGTCCTGTTCGCCTATGGTAACAGCGGCGTCGGTGGCTTCTCCCTGCACTATAACGTCAACACCCTGACCCTGCGCCACAACGGCGACACGGCCACCGACCTGACTTGGGCCGACACCGCTCGCGTCGCCAACGTCTGGGCGCACTACGCCGTCGTCCGCGACATGGCCGGCACCCGCGTCTACAAGGACGGGCGGCTGGTGATGACCTATGTCAACTCGATCGGCACCAGCTTTACCGCCACGCAACTGACCCTGGCCAACTATACGGGGGCAGCGGGTAATAGCACGCGCTTCACCGGCCGGATCGACGAGTTCCGCGCCACCCTGGGCGCATGCCGCTACGTCAAGCCGTTCACGCCGTCGTCGTTTGCGGCGGTGTCGACTTCTGTCCCGACCCTGACGACCATCACCCAAGCCCCGCAAGGCTCGTCGGGCACCGCCGCCAACAACGGCTCGGCGAAATATATTGCCGGACGGGGCATGGGCGCCCTGACGCGTCTCACGGCTGGCACCGCTCCATCGGGCGGCGACGGTCAGATCAGTTATTTCATCGCCACCTCCACGGTCTCGGCGGCGGGGCCGATCGGCACGGTCATCGTCTCGGGTCTGACCGACGCCGCCGCCGGCGCCTTCTATCCCCTCCCGCCGGTGGGTTCGGTCGTCGTCGAGCCTTATAGTGGCGCGCGCGTAAACTACGAGGTCACCGAAGCCGTCGGCGCGCGGATCAAGGTCGAGATGTGGGGCGGCGGCGGCGGCGGCAGTTCGGCCAACACCACCCTGACCACCAACGGCGGTGGCGGCGGCGGCTACACCGTCATCGAACTCGACCTTGTTCAGGGCGATCGGATCACCGTCCAGACGCCGTCGGGCGGCGCGGGCGGCGTCAACGCCGGTAGTGGCTCGGCGATCAACCTCGGTGGTTATCCCGACGGCGGTGACGGTTATCGGCCGGCCTTCACGGCGCTCAACTGCGGTGGCGGCGGCTCGGCGCGTCTGTGGGCGCAAGGCAATCTGGCGGCCGTCGCCGGCGGCGGCGGCGGCGCGGCCTATGGCGGCGGCGCCTATGACTTCCCTGGCGGCGCGGGCGGCGGCAACCTCGGCGGCCCCGGCGCCTATGACGGCGTCAACGCCCCCTTCCCCAATGGCGGCGGCACCCAGGTCGCGGGCGGCGCGGGTACGGCCAACGGCGTCAATGGGACGTCGCTGCAAGGCGGGCACGGCGGCACCGTTTCGGGGATCGCCAACAACGGCTGCGGCGGCGGCGGCGGCTATTATGGCGGCGGCGGCGGCGGCGCCTATAAGTCGGGTGGCGGCGGCTCGGGCTACGTCAACACGGGCCTGCCGGGCTACCGCACGGGCTCCACCACGGGCGGCTCGGGCAACTTGCCGGCCGGCATGTCCTCGCCCAACTACGTTTCGGGCATTGGCGTCGGCTCGAACGGCAAGGGCGGGGCGTTCACCAACGGCGGCAACGGCCGGATCGTCATCTCGGTCATCACCCCGACGCCGGGCAACGCGTCGGGCTCGATCGGCACCGTCAACGTCTCGGGCCTGAACAATTTCGGTCTGTTGATCGGCGTTCCGACCGGGCCGCTCGACACCATCGACGTCGTTGTTCCGGTCGGCGTCTCGGGCCAGCCCGGTTTCGCCGAAGGCCCGCTGACCACCATTGGCGTCGGCCCGGCCGAGACGATTCCCCGGGCCCAGGCGATCGTCATCGTCCCGATCAACGATCAGACCTCGATCCTGATCGAACCGCCGATCAACGCGCCACTGGAGGTCCCTGGCGACGGGATCGGCGAGCTTGACACGATCCTCGTCTCGCCGTTCGATTCGACCCAGACGGCGGGTGTCGCCTTCGATGTGGCGGACCTGCCGACCATCATCCTGACCGCGCCCGAGGGCGAGGCGGTCGAGATTCCCCCGGTCTTGACGTCCGGCGATATCGGCACGGTCGTGGTCACCACGCCCGAGGCGACGACCCAGATCATTCCGCCGGTCGAGACCAGCGGGGCCATCGGCACCATCACCGTGGTGACGGTGACGGGCGAGGCGTCGTGGAATAACAACGTCTCGGCCTCGGGCGATATCGGCACGATCACCCTCGCCGCGCCGACCGCCGACGCCGTGGGCGACGATCTAGCCATGGGCGATATCGGCACGATCACGGTGATCGCGCCCGAGGGCGTGGCGCTCCAGGACGCCGCCGTCGCGGCCGACATCGGCACCATCTCGGTCTATCCGATCGAGGGTGGTCAACCCGGCGACGCGGTCGGCGACATCCCCTATATTCAGGTGGTCACGCCGGGCGCGACGGTCAACGCCTCGTCGGGCGACGACATCTCGCTCTACGCCGATATCGGCACGATCTATGTCCTTCAGGTCTACGGCCAGGGCTTCTGGATTTCCGAGGACAACTACGTCCACGCCCTGCCGGACCCGCTGATCGTCAGCATCACCGCCGCGCCGCAAGCCTCGGCGCGCGGCGACGTCCATATCGTCCAGCCGCTGCCGACCATCGTCGTCACCGCGCCGGTCCCGGTCGCGGCCGGTAATGCCCTGGCCGACGCCTATACGGGCGATTTCATCATCCTGGTCGCCGCGCCGGTTCCGCAAACGGAACTGAACGCGAACGTCAACGTGGCGATGCCGCCGCCGATCGTCATCAACGGCAATGACGCGGAAGCCTCGCTTGACGTCACCGTCCCGTTCAGCGACACGGCGGTGTTCATCACCGGCCCCGAGGCTCTGGGTCTGGGCTTCCACGGGGCGGACCTTGGTCCGCCGATCGTGGTCACGCCGCCGCAGGGCGGTCCGGAGATTTCGGTCGAAATCTTTGTCGATCCCGGCACGATCCTGGTGGAGGCCCCGCGCTTCCACTATATCCCGCCGATCACGGTTCTGCCGCCCGAAGGCGTGGCGCTCGACGCCAAGTCGGCCGAGGCCTCCGGTGATCTCGGCACCATCACCATCGGGGTCCCGACCGGCGGCTACCAAGCCAACGTCGCCATCAACCTGCCGCTGCCGACGATCTTCGTCAACGTCCCGCAGGTCATGGTCTTCGCCTCGGTCGCCGTCTCGGGCGACATCGGGACGATCACCCTCACCCCGCCGGCCGCCACCCTGACCACCGGCGCGGACGCGGCCTTCACCCTGCCCGGCCCGATCGTCGTCACCGCGCCCGAGGCGACGGCGACGGCGGGCACGGCGGCGGCGACCTCCGGCGCCCTGACCACGATCACCCTGACCCCGCCTGAGGGTTCGGTCTCGACCGGCGCGGCGGCGGCGACCTCGGGCGCGATCGGCACGATCCTCGTCTCGCCGTTCGACGGCAGCGTCTTCATCTCCTATCCGGGCAATGCGTCGGGCGCGATCGGCACGATCGTCGTCACGCCGCCGGCCGCGACCGTCTCCAACGGCCGCAACCCCACGCGCTATCACAGCAGAGGGGGAGCCCGTGTCCGCGTTCACCAAGAAACTCGCCGCCGTGGCGGAAGCGCAATTCAACCAGTTCCATTGGTATCATGA

Genome Context

Tertiary structure

PDB ID

cab5ec95c9320bd5d06009e748063abcbc351ca7972be6b237b8606b06af9f3b

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,5025

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence