Protein

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Genbank accession
APU03064.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MANVIKTVVTYNLDGSRDFAVPFEYLARKFVKVTLIGQDRRELDITTDFRFSTKTTITTTRTWGAADGYSLIEIRRFTSVSDRLVDFQDGSILRANDLNLAQIQAIHIAEEARDLTADTIAVDNDGNLDARGRRLVNLVDGVDPQDAVTVKQLRETNGSAADVLNILAGTAGFNRVYGFQTIRMDTAQARITTVFKEGQRVYLTDRGLFFKFTSARYVVGSAPEALLSVEDELHIFVDSGGMLEFDDYESLSFLEAKNYNSYLADFRTNTPIIMGAYGDSITFGLQADGSQAPNNYPKTAASVISQRTRTPFTAINRGIPSDRALTTYLRYPQGIAGTRLSTIMLGVNDVQFATGNGADWNAIKSNLYSVENFHVVMRKFVAREILRGNAVVLLGMTQYVSLNLGELGGFSTPYLAQCYEAAIRSIAKEFNVMYVNTRKDIIGNYGISESCYDGLHPKDSFQKIIGVRLAAMLLHVDYKNPLEVGAGSIASANILHSPIVSNRVLVVSEKSGFSSPLGGAENNPAATGVKIPEGETGGSITVAVYIKDDSAVVFPTINGDTAYSFDMLWDEGNKQPDFDYDGDLLLKDRQFHVSAKSISGNAPKHRLTENYSQIYGGCYFHVTSRGWHILTFNAGPNAGNVSYEGLVVTSWESVRSNDVYLGVNGLATKDASGITIEKNILVCHKQQDGQYNVTTANLNPTTYMVNVETPQDDRLLLSQVLYKTQSGFQVRFYDKDNLLSEPAEFTIKIIGGR
Physico‐chemical
properties
protein length:753 AA
molecular weight: 82856,19780 Da
isoelectric point:5,47527
aromaticity:0,09695
hydropathy:-0,17424

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 IPR036514 DC_0735
DC_1510
STR
1–194
DC_1510 IPR036514
SSF52266
STR
276–473
SSF52266
cd00229
ENZ
276–471
cd00229
IPR013830
ENZ
276–460
IPR013830
APU03064.1
1 753
Architecture
ATT
STR
STR
RBD
ATT 1-130 | STR 131-194 | STR 270-475 | RBD 476-727 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APU03064.1
1 753
Domain Start End Length (AA) Confidence
N-terminal 1 254 254 0,9947
Central domain 255 453 200 0,5202
C-terminal 454 753 299 0,5470
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-254
Central
255-453
C-terminal
454-753

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP81
[NCBI] 		1927014 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Pektosvirus
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
5372a44900f88d6276ba73a76adfb35067d819610cb54918685c1e561f3d00ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7479
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50