Protein
View in Explore- Genbank accession
- VUF53774.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTSP
- Protein sequence
-
MAVAYPTIPIPDLEDAETVLSDDFLVVNQTDGTRKVKIDDVVNDLSITKIVYFTEGGYLKSKKDFAYDPETKRYYTWNGDYPKIILPDSTVEGAGGVSANAWSVFGELAATSSGRIVDYGSIGGQLDMDLEVADTFKVRLTSNTTISFENQAEGLEGVARTITVCITQTSGGNKVYWPDNVKWSYGRDPILTFTAGATDIFKLETYDNGLTWYGALIIAGAI
- Physico‐chemical
properties -
protein length: 222 AA molecular weight: 24232,81150 Da isoelectric point: 4,34656 aromaticity: 0,11261 hydropathy: -0,12252
Domains
Domains [InterPro]
DC_1864
STR
13–222
STR
13–222
G3DSA:2.10.10.80
ATT
47–104
ATT
47–104
IPR040775
RBD
51–105
RBD
51–105
1
222
Architecture
STR 13-46 | ATT 47-104 | STR 105-222
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
222
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 207 | 207 | 0,7866 |
| Central domain | 208 | 211 | 5 | 0,0049 |
| C-terminal | 212 | 222 | 10 | 0,9774 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-207
1-207
Central
208-211
208-211
C-terminal
212-222
212-222
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage rV5_ev147 [NCBI] |
2695843 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
VUF53774.1
[NCBI]
Genbank nucleotide accession
LR597647.1
[NCBI]
CDS location
range 41038 -> 41706
strand -
strand -
CDS
ATGGCTGTAGCTTATCCTACAATACCAATTCCAGATCTTGAAGATGCAGAAACAGTCCTGAGTGATGACTTCTTGGTTGTCAACCAGACTGATGGGACAAGAAAGGTTAAGATTGATGATGTTGTCAACGATCTTAGCATTACTAAGATAGTCTATTTCACAGAGGGTGGCTATCTTAAGAGCAAGAAGGACTTTGCTTATGACCCAGAGACTAAGCGCTACTACACGTGGAACGGGGATTATCCTAAAATAATCCTCCCAGACTCCACTGTAGAGGGTGCTGGGGGTGTGTCTGCAAATGCCTGGTCTGTTTTTGGTGAGCTTGCTGCAACTTCTTCTGGCAGGATAGTTGATTACGGATCTATCGGTGGTCAGCTTGATATGGATCTTGAAGTTGCGGATACCTTTAAGGTTCGACTAACTTCAAATACCACAATCTCTTTTGAAAATCAAGCAGAAGGTCTTGAAGGGGTGGCGAGAACTATAACCGTATGCATTACTCAGACCTCTGGCGGCAACAAAGTCTATTGGCCTGATAATGTTAAATGGTCCTACGGAAGAGATCCTATCCTAACATTTACAGCTGGTGCAACAGATATTTTCAAGTTGGAAACCTACGACAACGGGTTAACTTGGTACGGAGCACTGATTATCGCAGGAGCTATCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
1d25191b13310c1a6220f1da6cc82d9b0d4551c5282cb7daccec0bad39e1adeb
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50