Protein

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Genbank accession
WWQ72070.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTLLVQPSFSAGEMAPATYGRVDLARYYTGLRTCRNFQVLPEGGVQNRSGTKFIAEVKASANFTRLIPFQYSTEQTYILEFGNLYIRFVSNGGQVVSGSVPYEIASPYTTADLRDLKFTQSADVLTIVHPNYAPRELKRLAPTNWTLTTIDFQPGIAAPTGLSGSPRTGGSGDTTNYRYRVTAVSSKDTGSIESWASNTVTVASWDGKPGATLSWAAVTGADHYNIYKDKSSGVFGYIGQADTTSFSDINIAPDNDKTVPIGYNPFTGGNNPSVVGYFQQRLVFAASNSQPQTIWMSRVGDFHNFGYSAPYKDDDGIEFTIASREVNQIRHLVSLRDLLVLTSGAEWSVSSSKETGITPESISVSAQSYFGSSGVIPAVYANTALYIQARGGKLSTLAYNDIDAGFRPSDVSVLSSHLLRGYTIEDQAFTLTPNGVLWMVRNDGVLLGFTFMPEQQVFAWHRHDTDGEIESVATVPEGDEDILYMIVKRTINGSTKRYIERMQSRQLNKFESGDYVYDRSFFVDCGLTYDGRGTMSATLTGGTDWKYPNALTLEALSAPFNPGHVGRYLILYGGGDENNIGDVLTVKILAYDSPGVVSVEPQTIVPESLRGISATRWGFAATTISGLDHLEGKTVSILADGNVAPQAVVSGGSITLDGPSLVVHIGLPIIAEIETLDITMQNQQAFLGNKKRINQLVVLLEQSRGFWAGARSDRLRAASGWEYKQRATENYGEPIELKTGKAEISISTDWTDDGRIFIRQSDPLPITILGVLPNVQAGG
Physico‐chemical
properties
protein length:779 AA
molecular weight: 84749,84170 Da
isoelectric point:5,23654
aromaticity:0,10013
hydropathy:-0,18973

Domains

Domains [InterPro]
DC_0058
STR
165–774
DC_0058
IPR013783
STR
196–261
IPR013783
WWQ72070.1
1 779
Architecture
STR
STR 165-774 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWQ72070.1
1 779
Domain Start End Length (AA) Confidence
N-terminal 1 524 524 0,9454
Central domain 525 723 200 0,4372
C-terminal 724 779 55 0,0563
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-524
Central
525-723
C-terminal
724-779

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Shamal
[NCBI] 		3097009 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWQ72070.1 [NCBI]
Genbank nucleotide accession
OR683409 [NCBI]
CDS location
range 30132 -> 32471
strand +
CDS
ATGACCCTGCTCGTTCAGCCGTCTTTCAGCGCGGGCGAGATGGCGCCTGCGACCTATGGCCGTGTTGACCTGGCGCGCTACTACACCGGTCTGCGCACCTGTCGAAACTTCCAGGTTCTTCCCGAGGGTGGAGTCCAGAACCGGTCTGGTACGAAGTTCATCGCCGAGGTAAAGGCCAGCGCGAACTTCACTCGGCTGATCCCCTTCCAGTACTCGACCGAACAGACCTACATCTTGGAGTTCGGCAACCTGTATATCCGCTTCGTGAGCAATGGCGGGCAGGTTGTCAGCGGATCGGTGCCCTACGAGATCGCTAGTCCGTATACGACTGCCGATCTGCGCGATCTGAAGTTCACTCAGTCTGCCGACGTCCTGACGATCGTTCACCCGAACTACGCGCCGCGCGAGTTGAAGCGCCTTGCCCCGACCAACTGGACGCTGACCACTATCGACTTCCAGCCGGGCATCGCTGCTCCAACTGGACTCTCTGGCTCGCCGCGCACTGGTGGGTCTGGCGACACAACGAACTATCGATACCGGGTTACGGCAGTCAGTTCGAAGGACACAGGCTCTATCGAGTCCTGGGCGAGCAATACCGTCACTGTGGCGAGTTGGGATGGCAAGCCAGGCGCCACCCTGTCCTGGGCAGCCGTAACAGGTGCAGACCACTACAACATCTACAAGGACAAGTCATCAGGGGTTTTCGGCTACATCGGCCAGGCTGACACCACTTCGTTCAGCGACATCAACATCGCGCCTGACAACGACAAGACTGTGCCGATTGGATATAACCCATTCACTGGTGGCAACAATCCATCGGTCGTGGGCTACTTCCAGCAGCGGCTTGTGTTTGCGGCAAGCAACAGTCAGCCTCAAACCATCTGGATGAGCAGGGTCGGGGACTTCCATAACTTCGGATACTCGGCCCCCTACAAGGACGATGACGGCATCGAGTTCACGATTGCCAGCCGCGAGGTCAACCAGATTCGCCACCTCGTATCGCTGCGCGATCTTCTGGTGCTGACCTCAGGCGCAGAGTGGTCGGTCAGTTCGTCGAAAGAAACCGGCATCACTCCTGAGTCGATCTCTGTCAGCGCCCAGAGCTATTTCGGGTCGAGCGGTGTTATCCCGGCGGTCTATGCCAATACTGCGCTGTACATCCAGGCACGGGGCGGCAAGCTGTCTACGCTCGCCTACAACGACATCGATGCAGGCTTCAGGCCCAGCGATGTGAGCGTGCTTTCGTCTCACCTGCTGCGTGGGTACACCATCGAAGATCAGGCGTTCACGCTGACGCCCAATGGCGTCCTGTGGATGGTCCGTAACGATGGCGTGTTGCTCGGATTCACGTTCATGCCTGAACAGCAGGTTTTCGCCTGGCATCGCCACGATACAGACGGCGAGATCGAGTCCGTAGCGACTGTACCTGAAGGCGACGAGGACATCCTGTACATGATCGTCAAGCGCACGATTAATGGGTCTACCAAGCGTTACATCGAGCGCATGCAGTCGCGGCAGTTGAACAAGTTCGAGAGCGGTGATTACGTTTACGACCGCTCGTTCTTCGTCGACTGCGGCCTGACCTACGACGGGCGCGGCACCATGAGCGCTACGCTGACCGGCGGGACTGACTGGAAATACCCGAATGCGCTGACCCTTGAAGCGCTATCGGCTCCGTTCAATCCCGGGCATGTCGGTCGCTACCTGATCCTCTACGGCGGTGGAGACGAGAACAACATTGGCGATGTGCTGACCGTCAAGATTCTCGCCTATGACTCCCCAGGTGTCGTTTCCGTGGAGCCTCAGACGATTGTCCCTGAGTCATTGCGTGGGATCTCGGCGACGCGCTGGGGCTTTGCCGCAACAACCATCAGCGGCCTTGACCACCTTGAGGGCAAGACGGTTTCGATTCTCGCGGACGGCAACGTAGCGCCTCAGGCGGTTGTCTCTGGCGGGTCTATCACCCTGGATGGTCCTTCGCTAGTCGTCCATATCGGCCTCCCTATCATTGCGGAGATAGAGACGCTAGATATCACCATGCAGAACCAGCAGGCGTTCCTCGGCAACAAGAAGCGCATCAACCAGCTTGTCGTGCTGCTCGAGCAGAGTCGCGGCTTTTGGGCCGGCGCTCGGAGTGATCGTCTTAGGGCTGCGAGCGGATGGGAATACAAGCAACGTGCGACGGAAAACTACGGCGAGCCTATCGAACTGAAGACCGGCAAGGCTGAGATCAGTATCAGCACAGATTGGACGGACGACGGACGGATCTTCATCCGCCAGAGCGATCCGCTGCCCATCACCATCTTGGGAGTGTTGCCGAATGTCCAGGCCGGGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
96ba4fc2977e91dfc8c50d73c42a0bcfa05eb9252fb8830d5398e8cd7d7804a7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2859
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank