Protein

View in Explore
Genbank accession
XRQ88066.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MTITLSEVRGGFNTSTINSNFEKIEEALNSNVLSVKEGSNQMEQELDMNSQRIINLPAPINPTEPLRLEDLKTLEGDVSGIVPTVVRHTGDGVTFDFDSGTKVVAGPFSTKVYLNGIRLFPEVDYTTIGTKVRFINYVPTSTDKVDIYSYAPLEVVGPVGPAGPEGPQGPTGEQGPQGIQGQQGIQGPQGPQGVAGPTPIHQFGDGITEPTTSIRFANKIDPDTGAVIEWGPWVNIQGPQGVTGPVGPQGLSPEHEWDGPNLRFRNPDGTWGNYEDLTGPQGPTGATGPVGPKGDKGDSLFINAQGLYSGLSAYDDEVPPFIYFATDYSFDSAFQEQEFVGDGSTKSFTLSFTPNLKSNLYVWQGNSYQSLDTFEVAGNVLTFGEAPKDGVRITVRLQSPFVTKGAIFSKLSAASGDWSPAIPFGQGPQGPQGEQGPVGPTGPQGARGPQGEKGVQGDQGPQGIQGPQGERGPQGEKGPQGDRGLTGPQGPQGPQGIIGPQGPVGPTGAQGPIGPQGPEGPRGPMGPQGPTGDKGPQGDQGQRGSREWYIETTGTSWSQALIDAINPNPVVYDVGIQYNKSQGYSESRVYRGSGVWEQVELVQGFTIKVMNGVSATKLNIGSATALSSTTFGGTDTPLNQARSFSVRLGVISTPFATSAMVSLEDLQVLLSSFSRPSFVAGVQMTWSIRVNGSVVYESSRRATVTADGTTYYEFSGGTWAFTIPSPREGNTIEVFLNGYVVSAGTNFKLSRVATTGSQFSVVSLKA
Physico‐chemical
properties
protein length:766 AA
molecular weight: 80683,26170 Da
isoelectric point:4,70510
aromaticity:0,08616
hydropathy:-0,41802

Domains

Domains [InterPro]
DC_0258
STR
1–373
DC_0258 IPR050149 DC_0898
IPR008160
STR
157–196
IPR008160 DC_1341
IPR008160
STR
427–484
IPR008160
DC_0841
STR
472–561
DC_0841
XRQ88066.1
1 766
Architecture
STR
RBD
STR 1-561 | RBD 562-766
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Rostov-5342
[NCBI] 		3414238 Viruses >
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRQ88066.1 [NCBI]
Genbank nucleotide accession
PV403753.1 [NCBI]
CDS location
range 133 -> 2433
strand -
CDS
ATGACTATTACTCTTAGTGAAGTAAGAGGAGGCTTTAACACCTCCACAATTAACTCCAACTTTGAGAAGATTGAAGAAGCTCTAAACTCCAATGTTCTCTCAGTTAAGGAAGGTTCCAATCAAATGGAACAAGAGTTGGACATGAACTCCCAACGCATCATTAACCTACCTGCTCCAATCAACCCTACCGAACCTCTTCGACTGGAAGACCTTAAAACCTTAGAAGGTGATGTGTCTGGTATTGTTCCAACAGTGGTTCGACATACTGGTGATGGAGTTACTTTTGACTTCGACAGTGGTACTAAGGTAGTTGCAGGTCCTTTCTCTACCAAAGTGTATTTAAACGGTATCCGTCTGTTTCCAGAAGTGGATTACACTACAATAGGCACAAAGGTACGATTCATTAACTACGTTCCAACATCCACAGACAAGGTGGACATTTATTCATACGCTCCACTTGAAGTAGTTGGTCCGGTGGGTCCGGCAGGCCCAGAGGGTCCGCAAGGCCCTACTGGAGAACAAGGTCCGCAGGGTATTCAAGGACAACAAGGTATTCAGGGTCCGCAGGGACCACAAGGCGTAGCAGGTCCTACTCCAATCCACCAGTTTGGTGATGGTATCACTGAGCCTACTACTTCTATCCGATTCGCCAACAAGATTGACCCTGATACTGGTGCAGTCATTGAGTGGGGTCCTTGGGTAAATATTCAAGGTCCACAGGGAGTAACAGGTCCCGTTGGTCCACAAGGATTGTCTCCAGAACATGAGTGGGATGGCCCGAACCTACGATTCCGCAATCCAGATGGTACGTGGGGTAACTACGAAGACCTAACGGGTCCCCAAGGCCCTACCGGTGCTACTGGACCAGTTGGCCCGAAAGGTGATAAGGGTGACTCTCTGTTCATCAATGCTCAAGGTCTGTACAGTGGTTTGAGTGCATACGATGATGAAGTTCCACCATTTATCTACTTTGCAACAGACTATTCATTTGACTCTGCATTCCAAGAGCAGGAGTTTGTTGGAGATGGTTCTACTAAGAGTTTCACTCTGTCGTTCACTCCAAACTTGAAGAGTAACCTATATGTTTGGCAAGGCAACTCATACCAGTCCCTAGATACTTTTGAGGTAGCTGGTAACGTTCTAACGTTTGGTGAAGCTCCTAAAGATGGAGTCCGCATCACAGTACGTCTCCAGTCTCCGTTTGTGACTAAGGGTGCTATCTTTAGTAAGTTGAGCGCAGCGTCTGGTGACTGGTCTCCAGCTATTCCGTTTGGTCAAGGACCTCAAGGACCTCAAGGTGAGCAAGGACCAGTCGGCCCTACAGGTCCACAAGGTGCTCGCGGTCCGCAAGGCGAGAAGGGTGTGCAAGGAGACCAAGGGCCTCAAGGTATCCAAGGTCCCCAAGGGGAACGTGGCCCACAGGGTGAGAAAGGCCCTCAAGGGGATAGGGGTTTAACAGGCCCACAAGGGCCACAGGGTCCTCAAGGGATTATTGGTCCGCAAGGTCCAGTGGGACCAACAGGCGCTCAAGGCCCAATCGGGCCACAAGGCCCAGAAGGCCCACGAGGTCCAATGGGACCACAGGGTCCAACAGGTGACAAAGGTCCACAAGGAGACCAAGGTCAACGTGGTTCTCGTGAGTGGTATATTGAAACCACAGGCACTAGTTGGAGCCAAGCATTGATTGACGCTATTAACCCAAACCCTGTTGTGTATGATGTTGGTATCCAGTACAACAAATCTCAAGGGTATTCAGAATCTCGCGTGTATCGTGGTTCTGGAGTGTGGGAACAGGTGGAATTGGTTCAAGGTTTCACAATCAAAGTGATGAATGGTGTAAGTGCTACCAAGTTAAACATTGGGTCAGCTACTGCACTATCAAGTACAACGTTTGGTGGAACAGATACTCCACTTAACCAAGCACGGTCATTTAGTGTTCGTCTTGGAGTGATTAGTACCCCTTTCGCAACTTCTGCAATGGTCAGCTTGGAGGATTTACAAGTCCTGTTGTCCTCATTTAGCCGCCCATCGTTTGTAGCTGGTGTTCAAATGACGTGGAGCATTCGGGTAAACGGTTCAGTAGTGTATGAGTCTTCTAGACGTGCTACCGTTACAGCAGACGGCACAACTTATTACGAGTTTTCTGGAGGCACTTGGGCATTCACTATTCCTTCCCCAAGAGAGGGAAATACTATAGAAGTTTTCCTAAATGGGTATGTAGTATCCGCTGGTACTAACTTCAAGTTAAGTAGAGTAGCCACTACAGGTTCTCAATTTAGTGTAGTATCTTTGAAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
31a556e2c53a4b35f84066a459e662b1b709b08c1ddcfa4fcf8692c52929326b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6193
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50