Protein

View in Explore
Genbank accession
QXV74856.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MGYTWRKEAGTWIKVNSMFRKESGAWEPVKSAFQKVSGTHVNVFDSEVVVEITTNQTDLVLKSLFSSEDWDSGKAKTVHIHSGVTVSPSSLTYALIPQPASDTTIWGGVLTVINEGIIQGKGGAANSGVGGNALYIGTVSNSTKKLQIKNLGTIRAGGGGAGRGGTGGGGQYNYTATEGPYYSSSYGWWQNTNSLADDADGIKWGGSRVFSGNWSNTSPPTSVTIGIYTYNRGAQQSVEFSVYNYAVSRSYTATATTSGGAGGNGGRGQGSDGANASGSAGAAGGTNAGTGGTGGTGGTWGNSGATGFTGSSGNRTAGTAGTAGGVAGYAYSTALHNIVVPGIILGRVA
Physico‐chemical
properties
protein length:349 AA
molecular weight: 35184,94590 Da
isoelectric point:9,22080
aromaticity:0,09169
hydropathy:-0,27393

Domains

Domains [InterPro]
DC_1762
ATT
1–190
DC_1762 DC_0422
IPR007932
RBD
47–216
IPR007932
QXV74856.1
1 349
Architecture
ATT
RBD
ATT 1-190 | RBD 191-349
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph24
[NCBI] 		2836136 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74856.1 [NCBI]
Genbank nucleotide accession
MW980072.1 [NCBI]
CDS location
range 66812 -> 67861
strand -
CDS
ATGGGATACACATGGCGCAAAGAAGCAGGTACTTGGATCAAAGTTAACTCTATGTTCCGAAAGGAGTCTGGTGCCTGGGAACCTGTAAAAAGTGCTTTCCAGAAAGTATCAGGCACTCACGTCAATGTTTTTGATTCTGAAGTGGTCGTTGAAATCACGACTAACCAGACCGATCTGGTTCTGAAATCCCTTTTCTCTTCCGAGGATTGGGATTCTGGTAAGGCTAAAACCGTTCATATTCATAGTGGTGTGACGGTTTCCCCTTCGTCTCTGACGTATGCTTTGATCCCCCAACCTGCCTCAGATACAACAATCTGGGGCGGGGTTCTTACGGTTATTAATGAAGGGATTATCCAAGGTAAAGGGGGTGCTGCCAATTCAGGTGTTGGTGGTAATGCTCTTTATATTGGTACTGTCTCCAATAGTACCAAGAAGCTTCAGATCAAGAACCTGGGTACTATTAGAGCAGGTGGTGGTGGAGCAGGCAGGGGTGGTACTGGTGGTGGTGGTCAGTACAATTACACCGCTACTGAAGGTCCTTACTACAGCAGCAGTTATGGTTGGTGGCAGAATACGAACTCCCTTGCTGATGATGCGGACGGTATTAAGTGGGGAGGTTCTCGTGTGTTCTCTGGTAATTGGAGTAATACAAGTCCCCCCACCTCAGTAACTATTGGCATCTATACCTATAATCGAGGTGCTCAACAGAGTGTAGAATTCTCTGTCTATAACTACGCTGTGAGCAGATCCTATACTGCTACTGCAACTACCTCAGGCGGTGCAGGTGGTAATGGTGGTCGAGGTCAAGGATCTGATGGAGCCAATGCCTCAGGCTCTGCTGGTGCTGCTGGTGGAACCAATGCCGGTACAGGTGGTACTGGGGGTACGGGGGGAACTTGGGGTAACTCAGGTGCAACAGGCTTCACAGGTAGTTCTGGTAATCGTACCGCTGGTACAGCAGGAACTGCCGGAGGTGTAGCAGGTTACGCATACTCAACAGCACTGCACAATATCGTAGTTCCAGGCATTATTCTTGGACGTGTTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cbad4e286ab3293150ea410cf85131dac899743761653840c95ab82143465446
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7748
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank