Protein

View in Explore
Genbank accession
XHG83748.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,64
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKEDATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIHPDGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVVSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSAPYGPIYTARGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEVTYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTRTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRKGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAISVVKGSRMATYDGYITAVNGLTVELSQPVKFTAGDDHSLILKLRDGGVQSVNVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93892,85690 Da
isoelectric point:5,27451
aromaticity:0,09742
hydropathy:-0,37711

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
XHG83748.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHG83748.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 229 229 0,9673
Central domain 230 428 200 0,6853
C-terminal 429 852 423 0,1586
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-229
Central
230-428
C-terminal
429-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SgulP_SP580
[NCBI] 		3348354 No lineage information
Host Salmonella gallinarum
[NCBI] 		594 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHG83748.1 [NCBI]
Genbank nucleotide accession
PQ241077 [NCBI]
CDS location
range 24338 -> 26896
strand +
CDS
TTGGCGCTAGTAATCCACTATACCCGCAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCGATGAACTTCGTCGTGAACCACGTTCCCGACGGGGTGCCGGTTCGCGTTTTCATTGACGAAATTGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAGACGCGACTTTTCATATTGTGGAATCCGCTGGTGGTGGCGCTATTAAAGGCGTCATGAAGATTTTTAGCGTTATTCTTAAACCGTTGGCGAAACTATTATCACCATCCGTGAAAGGGGCGTCATCTAACCTTGCGAACTCGCAGGCGGATTCCCCAAACAACAGTCTTACTGACCGTAACAACAAGGCGCGCCCATACGAGCGCAGCTACGACATCTGCGGAACGGTGCAAACTATCCCAAATAACCTTATGTCTACTTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTACTACGACGCCGGGCGCGGCTACCTCGACATCCACCCGGACGGTATAACGGACGGGGATACCCGTGTATCAGATATAACAGGTACGTCGGTTGCCGTGTACGCGCCGTATACGTCACCAAATAATACATCCACACCACAGGTCATGGTTGGCGACCCGATAGAGCAAGGCCTGTACATCACCGTAGAATCTAACGAAGTAGACGGCGTGGTTCTGAAAGCACCTAACGGCCTGGGTATTTCTTTCTCTTACATGTCAGGGTATCCGTCTTTGTCAGGAAACATTGGCACTATATACGACCCAACAGGCGGCTCGGATTTTTCTGGAGTACTGGTGCCTAATGACACGTTTTCGCTGGTGTCCGCGTGGACAAATACAGACGTTGACCTGTCCGGCGGCGGGTATCAGGTAGTCAGCGTGTCCGAAGGGACTGTTACCTTTATAGTACCTGGCGGTCTCATTGGTAGGTGGCAAGAAATAAGACCGGGTTCCTTTTTCCGTGGTGACGGAGAGGCCTCGCTGCAACCAGACAACACGTATGAGAAAACTTTAACCGATTGGGTTTCAATAAACCGTACCGAAGTAGAGCGCATTGTAGCCAATATCGCCGCCGCGAATGGTATGTATAAAGACAACGGCAAATCGAAAACACTGGCGTCGGTCACCGCTGAGATACAGTACCAGTTACTTGATGAAAATAGTGCCCCTTACGGGCCGATATACACTGCGCGAGGAACCGTGTCCGGGCGTACTCCAGATTATAACGGCGTCACTATTTACGCCGACCTGCCGGTTGTGTCACGGGTGCGGGTGCGCGCCAGAAGGGTAACAGACCTCGACTTTAATTTCGAGGGGTCTGTGGTCGATGAAGTAACGTACGTTAACTTGTACGGGCAAACACGCGATAACACTCCGCACTACGGCAACAGAACTACCGTACACTCAATGCGCAAGCAGACACCACGCGCCGCGGAAGTTAAGCAACCGCAGTTGCGTATGATTGCCACCGAAATGGTATACAAATACCTTGGTAACGGTGTTTTCGAAGACACGAGGACCCCTAATACTCAGGCTGTGCAATCTCTTATCCGCCTGGCACGTGACCCAGATGTGGGTGGCTTAAACCTGACAGTGCGAAACATGGACAAGTTACTTGCCGTTCAGAAAGAGATTGAAGATTATTTCGGCGACAAGCAAGCGGGGGAATTTTGCTACACGTTCGATGACTATAAAACCACTATGCAGGACATAGTTAGTACTATAGCTGACGCTATATTCTGCACCCCATATCGGAAAGGGGCGGATATCCTTCTTGATTTTGAACGCCCTCGCATGGGCCCGGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAATGGACCAGAACATTTAACGATTCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTTACGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCCGCTAATCGCCGTCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATCTTTGCTTTGCCAAATCGTGCCATTAGTGTCGTTAAGGGCTCACGTATGGCTACCTACGATGGCTACATAACCGCAGTAAACGGGCTCACCGTAGAACTATCGCAACCGGTTAAGTTCACAGCGGGAGATGACCATTCTTTGATTCTCAAGTTACGTGATGGTGGAGTGCAAAGTGTTAATGTAGTCCCTGGAGCGCACGACCGGCAGGTAATCATGACGTCAGTGCCGCAAGAAGCCATTTACACAGGTAATAGTGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTCGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f280e29cc5a482215743e3f6db0301da7160bdc7b25b4c7dac6937be09110e31
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2995
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50