Protein

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Genbank accession
YP_009017619.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPTIKNRRAPASQWAASNPVLASGEIGIELDTNKFKVGNGVNAWGTLPYFVDELAIRALAPTSFMDNRDKALLVGSSTMAGMGTRLQAALTSRGVEGTFNRTAVGSWQASHISAAVGTRPLVAETFVIPASGPVTVKPINQTEGNNTVAGVTFPGWFGDVIGMLSSPANQSEWTFTRDAPGQEVTIPEGTPFRPSVPSGRRRGLVLLNFGKNSLTTTVTGWDVAQLIAQTETIDSYFGGPDGRVLVIGHFVNTTTPASSTTRDKTKAYNDYCRQKFGDRFFDLGAYLTGTQVWADTGITPTSEDTAEQALGNKPPSLSGDNGHLNASGYDAAVKAIMARVDALKWTPPPPPPSWVVKATDDFNASDGLLTGRVLPTGGLTWKTLGSGTSLSIVGNRVATTSGVQKSVVSTGSVDGRVSFTITSLGSDPATKSARLLVRAKDQSTYYFAAPRVSNVSDGLSIWKNVAGTQTALKSHTSYVPVVGDEMEFEVDGSTLRLFVNGVERLVATDNELTTGDFGLELGSTQTTFDNFKVSTKAA
Physico‐chemical
properties
protein length:538 AA
molecular weight: 56907,05460 Da
isoelectric point:6,47842
aromaticity:0,07993
hydropathy:-0,17584

Domains

Domains [InterPro]
IPR041352
ATT
4–41
IPR041352 SSF52266 G3DSA:2.60.120.560
SSF69349
STR
4–169
SSF69349 IPR036514 G3DSA:2.60.120.560
DC_1040
STR
4–370
DC_1040
YP_009017619.1
1 538
Architecture
ATT
STR
RBD
ATT 4-41 | STR 42-370 | RBD 371-533 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage ReqiPepy6
[NCBI] 		691965 Uroviricota > Caudoviricetes > Pepyhexavirus >
Host Prescottella equi
[NCBI] 		43767 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009017619.1 [NCBI]
Genbank nucleotide accession
NC_023735 [NCBI]
CDS location
range 5343 -> 6959
strand +
CDS
ATGCCGACAATCAAGAATAGGCGAGCGCCGGCATCTCAATGGGCTGCCTCAAACCCTGTGTTGGCCTCTGGGGAGATCGGCATTGAGCTAGATACCAACAAGTTTAAGGTCGGTAATGGCGTCAATGCTTGGGGTACTCTACCTTATTTTGTTGATGAACTTGCGATTCGAGCTCTTGCTCCGACGTCCTTCATGGATAATCGTGACAAGGCTTTGCTCGTCGGATCGTCCACCATGGCCGGAATGGGTACGCGCCTTCAAGCGGCCTTGACCAGTCGAGGTGTTGAAGGTACTTTCAATCGAACTGCGGTCGGTTCTTGGCAGGCCTCGCACATCTCTGCGGCTGTTGGCACCCGACCTCTCGTCGCAGAGACGTTCGTTATTCCGGCCAGTGGTCCGGTAACGGTGAAGCCGATCAATCAGACCGAAGGCAACAACACCGTCGCGGGTGTCACGTTCCCTGGTTGGTTTGGTGACGTCATCGGAATGCTGTCTTCCCCGGCGAATCAGTCTGAGTGGACATTCACTCGCGATGCTCCGGGTCAGGAAGTCACGATTCCGGAAGGAACTCCGTTCCGGCCGAGCGTTCCATCTGGTCGACGACGTGGACTTGTTCTTCTCAACTTCGGAAAGAATTCACTTACCACAACCGTGACTGGTTGGGATGTTGCACAGCTGATTGCTCAGACCGAGACGATCGACTCGTACTTTGGCGGTCCGGACGGACGAGTTCTGGTGATTGGACACTTCGTCAACACCACGACTCCGGCATCGTCGACGACTCGTGACAAGACTAAAGCATACAACGATTACTGTCGACAGAAGTTCGGTGATCGATTCTTCGATCTTGGCGCCTATCTTACCGGCACTCAGGTTTGGGCTGACACGGGCATCACACCCACTTCCGAAGACACTGCCGAGCAGGCTCTCGGAAACAAGCCGCCATCTCTATCTGGAGACAATGGGCATCTCAATGCTTCTGGCTATGACGCCGCCGTTAAGGCGATCATGGCGAGAGTGGACGCTCTGAAGTGGACGCCTCCGCCTCCTCCGCCTTCATGGGTAGTCAAAGCTACTGACGACTTCAATGCATCTGACGGTCTTTTGACTGGTCGTGTTTTGCCGACGGGTGGGCTCACCTGGAAGACGCTTGGTTCCGGAACAAGTCTGAGTATCGTCGGCAATCGAGTCGCGACAACCAGTGGTGTACAGAAGTCCGTCGTGTCTACCGGTTCTGTTGACGGTCGAGTTTCGTTTACGATCACTTCTCTCGGGTCCGATCCAGCAACAAAGTCGGCTCGTCTCCTGGTTCGAGCGAAAGATCAAAGCACGTACTACTTCGCAGCGCCGCGAGTCAGCAATGTGTCCGATGGTCTGTCCATCTGGAAGAATGTCGCCGGAACTCAAACGGCTCTTAAGAGTCACACTTCTTATGTTCCTGTCGTCGGCGACGAGATGGAGTTCGAAGTGGATGGTTCGACGCTTCGTTTGTTCGTCAACGGGGTCGAAAGGTTGGTTGCCACGGACAACGAACTTACAACCGGCGACTTTGGTCTTGAGCTCGGAAGTACTCAGACCACGTTCGACAATTTCAAGGTTTCGACTAAGGCTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4582f44bab53cbba37ca2104ff641c244fe1f9a74f8d7a2410320c891fffd65e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50