Protein

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Genbank accession
XPP57379.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKITVGTPVTAPLTPGRDDTNVWPTHTAKYGAGGLEVVETTSDRDAISDERKADKAVLVRSDDGGLPALYEWSSGGWNKVDIGDFSGMTITDGANVFNDIIEIKLANITANQYPNDSIDSVTLTAQGSLDWATMGDPSSGSRATSVLVEPPLQTYSDPDSTGVTRLRVKEGSYEPMKAPGYLAYVDFPEKVIGKLGYHTLGHYDSAIWPTDTVVSGGGLIPTIVNEKYIGLQEYDGKDPNKTGGTDFLVAFRVAFKGHAANAGKIKAYLAKQPAPGTSASADYLRDVNGELLVREVNYKTGDEYGYIEVLGIVNAKGLTNMSMHVEHNFSDSLLIEERAVGLSGVMVQALESSSKTGAALMQYEIDTKQNIEFNKIYYGDSIMDFNWEATHGLPMEEIQAGIGANLPDGFHFKNLSNIHIGSADDHIYVHDAGTVCDFSLGKIFNAFDTRALHGKEINVKATIIDKDAPFTIGVVKWAGKPDQYTNNIFSSRNNAAVVFDAGWELVGSLFFPSDAVTGDHTLTKKFTVPSDAKNFAVIIYPGVPNSPLTLKIKDFDVDVVNPFYGYEMYAAGKLNELHLEEDTEFAHFSQANENYVSLRYTIGKSADGDPMPVGVLRKGKADITLDPSINKIVGSAATSGEGGLKFGKDGKAIVNTTLWIHSEQPDKTSSDVTFWYELVNSNGIATKIIPSETTFKVSGNSSGDYSMKEFSLDVITGDRIVLKASADKDDGAFLQSNSPAHPLVDIEIRIDELTAFANDDPFVGVELDQFDKVYTGVLTATKYVSHTDSATFHIEVPDDMNVSVLEAIKKLDDGTVTTVKSLDWSYNLKSQMLTVYFGEVVEECAITLGIYTA
Physico‐chemical
properties
protein length:854 AA
molecular weight: 92621,50080 Da
isoelectric point:4,71306
aromaticity:0,09368
hydropathy:-0,21686

Domains

Domains [InterPro]
DC_0389
STR
1–854
DC_0389
XPP57379.1
1 854
Architecture
STR
STR 1-854
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP57379.1
1 854
Domain Start End Length (AA) Confidence
N-terminal 1 350 350 0,4508
Central domain 351 564 215 0,2019
C-terminal 565 854 289 0,8724
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-350
Central
351-564
C-terminal
565-854

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Pylo
[NCBI] 		3388594 Viruses >
Host Vibrio campbellii
[NCBI] 		680 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP57379.1 [NCBI]
Genbank nucleotide accession
PQ768830.1 [NCBI]
CDS location
range 89224 -> 91788
strand +
CDS
ATGACAAAAATAACAGTTGGTACTCCAGTTACAGCACCTCTTACACCAGGTCGTGATGATACCAATGTTTGGCCAACTCACACAGCTAAGTACGGGGCTGGTGGTCTAGAGGTAGTAGAGACTACCTCTGATAGAGATGCCATTTCTGATGAAAGAAAGGCAGATAAAGCTGTACTAGTACGTTCAGACGATGGAGGGCTGCCTGCCCTCTATGAATGGTCTTCAGGTGGCTGGAATAAAGTAGATATTGGAGATTTCTCCGGTATGACAATCACAGATGGAGCTAATGTCTTTAACGATATAATAGAAATAAAATTAGCTAATATAACAGCTAATCAGTACCCTAACGACTCAATTGACTCTGTGACACTAACGGCACAAGGATCTCTAGATTGGGCTACGATGGGCGATCCTTCCTCTGGTAGTAGAGCAACATCAGTATTAGTAGAGCCTCCTCTACAAACATACTCAGACCCAGACAGCACAGGAGTTACTCGTCTTAGAGTGAAGGAGGGTTCCTATGAGCCAATGAAAGCTCCAGGATACTTAGCTTACGTTGACTTCCCAGAAAAAGTAATTGGTAAACTAGGATACCATACTCTAGGTCATTACGATAGTGCTATTTGGCCAACTGATACTGTAGTATCTGGTGGTGGATTAATCCCTACTATAGTAAACGAAAAATATATCGGATTGCAAGAGTATGACGGGAAAGATCCTAATAAGACAGGTGGTACAGACTTTTTAGTAGCTTTCCGAGTTGCCTTTAAAGGTCACGCTGCAAATGCAGGTAAAATTAAAGCTTACCTAGCTAAGCAACCTGCACCAGGTACTTCCGCTTCCGCCGATTATCTAAGAGATGTAAACGGTGAGTTACTAGTTAGAGAAGTTAACTATAAAACAGGGGATGAGTACGGTTATATAGAGGTACTTGGTATTGTAAATGCCAAAGGTCTTACTAACATGTCTATGCATGTTGAGCACAATTTTAGTGATAGCTTACTTATTGAAGAACGAGCTGTCGGATTGTCCGGTGTAATGGTACAAGCACTAGAATCTTCATCTAAAACTGGTGCTGCATTAATGCAGTATGAAATAGATACTAAACAAAACATCGAGTTTAATAAGATCTATTACGGTGATAGCATTATGGATTTCAACTGGGAAGCTACTCATGGCTTACCGATGGAAGAAATCCAAGCAGGTATAGGAGCAAACCTTCCTGACGGTTTCCACTTTAAAAACCTGTCAAACATCCACATCGGTAGTGCAGATGACCACATCTATGTGCACGATGCTGGTACAGTGTGTGACTTCAGTCTAGGTAAAATCTTTAATGCTTTCGATACTAGAGCACTGCATGGTAAAGAAATCAACGTTAAAGCTACGATTATAGACAAAGATGCACCGTTTACTATTGGCGTAGTTAAATGGGCAGGAAAACCAGACCAATACACTAATAACATTTTCTCTAGCAGAAACAATGCTGCAGTAGTATTTGACGCTGGTTGGGAACTAGTAGGTTCATTATTCTTCCCTTCGGATGCTGTAACAGGTGACCATACCCTAACCAAGAAGTTTACAGTACCTTCGGATGCTAAGAACTTTGCAGTTATTATTTACCCTGGTGTACCTAACTCTCCGCTTACACTGAAAATTAAAGACTTCGATGTTGATGTGGTTAATCCTTTCTATGGATACGAAATGTATGCAGCCGGAAAGCTTAACGAGCTGCACCTAGAAGAAGACACTGAGTTTGCTCATTTCAGTCAAGCTAATGAGAATTATGTATCTCTTCGCTATACAATAGGTAAGTCAGCAGATGGTGACCCAATGCCTGTAGGTGTTTTGAGAAAGGGTAAAGCTGATATTACGTTAGACCCATCAATTAATAAAATTGTTGGTTCAGCTGCTACAAGTGGTGAAGGTGGTCTTAAATTCGGGAAAGATGGTAAAGCTATCGTTAATACCACTTTATGGATTCATTCAGAGCAACCTGACAAAACCTCGTCAGACGTTACATTCTGGTATGAGCTAGTTAACTCTAATGGTATCGCCACTAAGATTATACCATCAGAAACTACATTCAAGGTTAGCGGTAACTCTTCAGGAGATTACTCAATGAAAGAGTTTTCACTTGATGTAATAACTGGTGATAGAATCGTTCTTAAAGCTTCTGCGGATAAGGATGATGGTGCGTTTCTTCAATCCAATTCACCTGCCCATCCACTGGTTGATATTGAGATTAGAATCGATGAGCTAACAGCCTTTGCTAATGACGATCCATTTGTGGGCGTAGAACTGGATCAATTTGATAAAGTATATACCGGAGTACTTACAGCTACTAAGTATGTATCGCATACTGACTCAGCTACATTCCATATTGAGGTACCAGATGATATGAATGTATCAGTACTAGAAGCTATTAAGAAACTCGATGATGGAACAGTAACAACAGTGAAAAGCCTAGACTGGTCTTACAACTTGAAATCCCAAATGCTAACAGTGTATTTTGGTGAAGTTGTAGAAGAATGTGCTATTACTCTAGGTATTTATACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97b0c2573bdef3ef31993f9a328a307192546ad9db70c5eeaf30a2e23b2fb8f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4546
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50