Protein

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Genbank accession
YP_009594687.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKQVKGTLDVARYATSQGRNLARSVSDLNFDTNGNLVIDAYTTEEFNKIISVLPISHYGSFNYLPAGVYGSYEGASDVPGYRYRKIFVEDSGTLTILRSGTNGAKRGLYYSFLDNILTTTNLNTAINTNKEYKPGYFGSSYTAKMAYASDARICAGIALNASGDAYTFISWMNNTLNDTQHVGSIVPASTIQPNGGTMRFVMTGNTEIYFFNEVSNGNELVIELRSVPISQVRASATTLTVTEYANWTTNGFYGEAIANRNIVLNKMKFSSNAADKPYMLTPSTTTSTEPYMTGVDLYAAQNASGTIRLRVVGDAWCTTVSRNTRPKHSYSFLLNPSTKVATLEAGNTAPLTITDPGSGTALNVAGNTYTADPILTYNGNRVNQIMGYYYFDNGTIIAIATENLGSAPTKIERAQYPNATSIFDTLQVRNHTSTNWITGSMNTAFGSPVGSEVMSFEWLPNNRYKVGSTITGNVFRQSVNQYKPNPTYTFGSVSMGTIKGFEPTTNRYATAWNVNYNIFINYINGTNVTTNGGIFIENIRQSTAVSYNEDMIGTGSMSINNTLLTNLKNQQLANATYPVDTSNTSVLTLFVPQQTDCPAFALISGVTTSLTNYLKIVEVNVNTRTGAITTLTFKRLVYEGAGDYGGIASPATYGITYASVGISIYDAGTFYVIGGADPYIYKTQGDTNSVTWRAKVTKSTGQIDHFEVMGRYQTHTPSDTQLPYAVPGVGFGYIDFERNAADDRVRIIFQPTGTTLAQYNAWAAVGSPILLASQDVAQGFIIYFTENTSVLLSGKSFTMPIQNINLANVKANPANSTFHIYVTMEEGLAKYLATEQVIAETGTTAYNTFWIGTVTTNANQIETINIFKRSRLDVFGASLEAAGSSFPVSYGLPSASGIINW
Physico‐chemical
properties
protein length:902 AA
molecular weight: 98054,44670 Da
isoelectric point:6,24191
aromaticity:0,11308
hydropathy:-0,15710

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009594687.1
1 902
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,8323
Central domain 46 244 200 0,5975
C-terminal 245 902 657 0,5702
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-244
C-terminal
245-902

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_PcaM_CBB
[NCBI] 		2772511 Uroviricota > Caudoviricetes > Mimasvirus >
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009594687.1 [NCBI]
Genbank nucleotide accession
NC_041878 [NCBI]
CDS location
range 76602 -> 79310
strand +
CDS
ATGGCAAAACAAGTAAAAGGTACGTTGGATGTAGCCCGATACGCCACTTCTCAAGGACGAAATCTTGCACGGTCAGTGAGTGATTTGAACTTTGATACAAATGGTAATTTGGTCATTGATGCGTACACGACTGAAGAATTCAACAAAATTATTAGTGTACTACCAATTTCACACTATGGTTCATTTAACTACTTACCTGCGGGTGTGTATGGTTCATATGAAGGTGCGAGTGATGTTCCTGGTTATCGTTATCGTAAAATATTTGTAGAAGATAGCGGTACATTAACAATTCTACGTTCAGGCACTAACGGTGCTAAGCGTGGATTGTATTATTCATTTTTGGATAATATATTAACGACAACAAACTTAAACACAGCTATTAACACTAATAAAGAGTACAAGCCAGGATATTTTGGTAGTTCTTATACTGCTAAAATGGCGTATGCCAGTGATGCTAGAATATGTGCAGGTATTGCACTTAATGCGTCAGGTGATGCATATACATTTATTTCATGGATGAATAATACATTAAACGATACCCAACACGTAGGTTCAATTGTACCAGCAAGTACTATACAACCTAATGGTGGAACAATGCGTTTCGTAATGACAGGAAATACTGAGATTTACTTCTTCAATGAAGTCAGTAATGGTAATGAATTGGTAATTGAATTACGTTCTGTTCCAATTTCTCAAGTCCGTGCATCTGCTACAACTTTAACTGTAACTGAATATGCCAACTGGACAACAAATGGTTTTTATGGTGAAGCTATCGCCAACCGAAATATAGTACTTAACAAGATGAAATTTAGTTCTAATGCTGCCGATAAACCATATATGTTAACTCCATCAACAACTACAAGCACTGAACCATATATGACAGGTGTGGATTTGTATGCTGCACAAAATGCTTCTGGTACAATTCGATTGCGTGTTGTTGGAGATGCGTGGTGTACAACTGTGTCAAGAAATACACGACCTAAACATAGCTATAGTTTTTTACTAAACCCTAGTACTAAAGTGGCTACATTAGAAGCCGGAAATACAGCCCCATTAACAATTACAGATCCTGGTTCTGGCACTGCATTAAACGTTGCTGGAAATACTTATACAGCAGACCCTATATTAACATATAATGGAAATAGAGTAAACCAAATAATGGGATATTACTATTTTGATAATGGAACCATTATCGCAATTGCTACTGAAAACTTAGGAAGTGCTCCGACAAAAATTGAACGTGCTCAATATCCAAATGCAACTTCAATTTTTGATACATTACAAGTTCGTAATCATACAAGTACCAACTGGATTACTGGTTCAATGAATACTGCATTTGGTTCACCAGTAGGTTCTGAAGTTATGAGTTTTGAATGGCTACCTAATAATAGATACAAGGTTGGTTCAACGATTACTGGAAATGTTTTCAGACAATCTGTTAATCAATATAAACCAAATCCAACATATACATTTGGATCAGTATCTATGGGTACAATCAAAGGATTTGAACCAACTACAAACCGTTATGCAACAGCATGGAATGTTAACTATAACATTTTCATTAACTACATAAATGGTACGAATGTTACTACTAATGGTGGAATTTTCATTGAAAATATTCGTCAAAGTACTGCTGTAAGTTATAATGAAGATATGATTGGTACAGGTTCAATGAGTATTAACAATACTCTTTTAACAAACTTAAAAAACCAACAACTGGCTAATGCAACATATCCAGTCGATACTTCGAATACGTCAGTACTTACACTATTTGTTCCACAACAAACAGACTGTCCTGCATTTGCATTAATTAGTGGAGTTACTACATCATTAACAAACTATCTAAAAATTGTTGAAGTAAATGTTAACACCAGAACTGGTGCTATTACCACATTAACTTTCAAGAGACTTGTATATGAAGGTGCTGGTGATTATGGTGGAATAGCTTCACCTGCAACTTATGGTATAACTTATGCTTCAGTTGGTATTTCAATTTATGACGCTGGTACATTTTATGTCATAGGTGGTGCTGACCCATATATCTATAAAACACAAGGTGACACTAATAGTGTTACATGGAGAGCAAAGGTAACTAAAAGTACTGGTCAAATAGATCATTTCGAAGTTATGGGTAGATACCAAACACATACACCAAGTGATACACAATTACCTTATGCAGTTCCTGGGGTGGGATTCGGTTATATTGATTTCGAAAGAAACGCTGCTGATGACCGTGTTCGTATTATTTTCCAACCTACCGGAACAACATTAGCACAATATAATGCATGGGCTGCTGTAGGAAGTCCAATTCTACTAGCATCACAGGATGTGGCTCAAGGATTTATTATATACTTCACTGAAAATACTTCAGTACTGTTGAGTGGTAAATCATTTACCATGCCAATTCAAAACATAAACTTAGCAAACGTTAAGGCAAACCCTGCTAACAGCACATTCCACATTTATGTAACTATGGAAGAAGGTCTTGCCAAGTACTTAGCTACTGAACAGGTTATTGCAGAAACTGGTACAACAGCGTATAATACATTCTGGATTGGAACTGTAACTACAAATGCTAACCAAATAGAAACAATTAATATTTTTAAACGCAGCCGATTAGATGTATTTGGTGCATCACTAGAAGCAGCAGGTTCTTCATTCCCTGTGAGTTATGGATTACCATCTGCAAGCGGTATTATTAACTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1511ff3193826c6b964d021c6091df7bdae0c52902b9308ff81061280df77063
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3719
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50