Protein

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Genbank accession
XCO56144.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPQGAILTNIGLSKISSATPLEQLNVVQLAVGDGAGGYPALTPDMTGLVNEVWRGTASNPIRDPNNANVLIFEAAIPASAGPFTIREQAIFDDAGDMIAIGQTSVVEKPDPNESVGVVATMRLHIALSNAEQVDLFYTDTTATHHNSLTNRDEADSHPASAVTGVSEMRNGIIRGNVFPHEPEKTVKNGDYVPERTTHLNVLIGGEAAIVAMSPISVGAVSSLTDFSATIGGTLVTFTKTNTSNYLTLNDALTSPYITLNSQIEVKERVNGSGGDGIKFDVVLTASVTPNGFDIIQSVSEPSLSLKMRNESRRFSSFGVVKESSNLSTFCRDVALNKYDANYLDHGTYNYSGNLFLADGQMLSGKGSGNTISSNKGTRLKPTDSDAKIRLFPHAKLSDVFIDGEYSESNKAVDGIYIKPHDSGDTDYVPGDPTTLSCIWPKVSNVNIQKFFNNISIEGKSFNLWFEHLVSVAGRFKQVGGGESTLTACNLSDTTGQEIVLNDGGKISVHGGAIQNTNGGYPCIINKGKMLLQGVYMENARAGANNNGYLIDNYGTLTLVQPKSMAIADKAVRGRYGSKTYLRDVEFTGNNANTNEVFNGRGDNNNEGGGYLYFENLTLRSCLTTSINYIEHAIGGYSDKGYSIECGNEKTLYLNEGANLTDLTSSGGTLTANNTAEYLTNGESLRFVAASSAPSVTLTKTLRGLSGHLVMVRWAVLAKPSASDNTRFLANIGGDVTCAYVNVEFDADSANGNTDKWYYITTSAVLDPQLNEHVITCNLFTSLGASGSSNGTSHIDRIELVDCGLVHKP
Physico‐chemical
properties
protein length:808 AA
molecular weight: 86295,10190 Da
isoelectric point:5,13537
aromaticity:0,07426
hydropathy:-0,22327

Domains

Domains [InterPro]
IPR022225
ATT
5–135
IPR022225
IPR051934
Unmapped
5–143
IPR051934
DC_0194
STR
14–808
DC_0194
XCO56144.1
1 808
Architecture
ATT
STR
ATT 5-135 | STR 136-808
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO56144.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 326 326 0,9448
Central domain 327 638 313 0,9699
C-terminal 639 808 169 0,9835
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-326
Central
327-638
C-terminal
639-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaM_R20L
[NCBI] 		3161149 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO56144.1 [NCBI]
Genbank nucleotide accession
PP839372.1 [NCBI]
CDS location
range 21677 -> 24103
strand +
CDS
ATGCCACAAGGTGCAATTTTAACAAACATTGGACTTTCAAAAATTTCAAGCGCAACGCCGCTAGAGCAGCTGAATGTTGTCCAGCTTGCTGTCGGTGATGGCGCTGGCGGTTATCCTGCTTTAACGCCGGATATGACCGGGTTGGTTAACGAGGTTTGGCGCGGAACCGCATCAAACCCAATCCGCGACCCGAACAATGCAAATGTATTGATTTTCGAAGCAGCGATTCCGGCCAGCGCAGGGCCATTTACAATCCGAGAACAGGCAATCTTTGATGACGCTGGCGACATGATAGCTATTGGTCAAACTTCCGTTGTTGAAAAGCCAGATCCAAATGAATCGGTTGGTGTAGTGGCCACAATGAGACTGCATATTGCTCTATCCAATGCAGAGCAGGTAGATCTTTTTTATACGGATACTACTGCAACTCACCACAACTCATTAACTAACCGCGATGAGGCAGACTCGCATCCTGCTAGCGCAGTTACTGGTGTTAGTGAAATGCGTAATGGAATCATTCGTGGTAATGTTTTTCCACATGAGCCAGAGAAAACAGTTAAAAACGGCGACTATGTTCCAGAGAGAACCACACACCTTAACGTTTTGATTGGCGGCGAGGCTGCTATTGTTGCTATGTCTCCGATATCCGTAGGTGCTGTAAGTTCTTTGACGGATTTTAGTGCGACAATAGGTGGAACGCTCGTTACTTTCACAAAGACAAATACATCTAATTATTTAACTTTAAATGACGCATTAACAAGTCCATACATCACACTAAACTCACAGATAGAGGTAAAAGAGCGAGTTAACGGTAGCGGTGGGGATGGAATAAAGTTTGATGTAGTTCTCACCGCATCTGTAACGCCAAACGGATTTGACATTATCCAGAGTGTAAGCGAGCCCTCGTTGTCATTAAAAATGAGAAACGAATCAAGAAGATTTTCTTCTTTCGGTGTCGTAAAGGAGTCGTCAAACCTAAGCACTTTCTGTCGAGATGTTGCACTTAATAAGTACGATGCTAATTATCTAGATCATGGAACGTACAATTACTCTGGAAATTTATTTCTTGCTGATGGTCAGATGCTTAGCGGGAAAGGCTCAGGAAACACTATCTCATCAAACAAAGGGACAAGGCTAAAACCAACTGATTCTGATGCAAAAATTCGATTATTCCCGCATGCGAAATTGAGTGACGTTTTTATAGACGGCGAGTACTCGGAATCTAACAAAGCAGTGGATGGCATATACATTAAACCTCACGACTCGGGTGACACTGATTATGTGCCGGGTGACCCGACCACGCTGTCCTGTATTTGGCCAAAGGTATCAAATGTAAACATCCAAAAATTTTTCAACAATATATCAATCGAAGGTAAATCATTTAACTTGTGGTTTGAGCATCTTGTTTCGGTGGCTGGAAGATTTAAGCAAGTGGGTGGTGGAGAGTCAACATTGACAGCGTGCAACCTTTCAGACACAACAGGTCAGGAAATTGTGCTTAATGATGGTGGGAAAATCTCAGTTCATGGTGGAGCAATTCAAAACACAAACGGTGGATACCCTTGCATTATAAATAAAGGTAAAATGCTTCTTCAGGGCGTTTACATGGAAAATGCAAGAGCTGGCGCAAATAATAATGGTTATCTGATTGATAATTACGGAACGTTAACCCTAGTTCAGCCTAAGTCAATGGCAATAGCTGATAAAGCGGTTCGTGGTAGATATGGCAGTAAAACCTATTTACGTGATGTGGAATTTACAGGAAATAATGCCAACACCAATGAAGTTTTCAATGGTCGTGGTGACAATAACAATGAAGGTGGTGGATACCTTTATTTTGAAAACTTAACCCTTAGAAGCTGTCTTACAACATCTATAAATTATATAGAACATGCTATAGGTGGTTATAGCGACAAAGGTTACTCTATTGAATGTGGTAATGAAAAAACATTGTATCTGAACGAAGGGGCGAATCTGACTGATTTAACATCTTCAGGTGGCACACTGACTGCAAACAATACAGCAGAGTATTTAACAAATGGTGAATCGCTTCGGTTTGTAGCAGCATCATCAGCACCAAGTGTCACACTCACAAAAACATTGCGTGGCTTATCGGGTCACTTAGTTATGGTCAGATGGGCTGTTCTGGCTAAACCTTCAGCATCTGATAACACCAGGTTCCTAGCAAACATCGGTGGCGATGTAACTTGCGCTTATGTTAACGTTGAGTTTGACGCTGATTCAGCTAATGGGAATACTGACAAATGGTATTACATAACAACAAGCGCAGTTCTTGATCCTCAACTAAATGAACATGTCATTACTTGCAATTTATTTACCTCACTTGGCGCGTCAGGTTCAAGTAATGGCACTAGCCATATCGACAGAATTGAGCTTGTTGATTGCGGTTTAGTTCATAAGCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
48c710cff2dacab4b2c6a82b95b93f80ac6a30128d47ed16d7caf598dab58248
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7503
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50