Protein

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Genbank accession
WNO23860.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPVGFQAFTDTGVYQIDGRTPNYQMVQSMAADSAVGSLPLAMNDAGKPFTISLPHATFTFSSVAGPMYAVLASGAVGITLWSAKRNGSSYSVTFVTERPCNVRLFVFDQVPVAAGNFGLQVFDAGGRLVADSSKPFLRVLDVIFEDYMNGVGWTVEGAPSPPWHSRSYGVPVLISAIYSVHRAWSYDPGVVELSSIRVDGGNVSWGTALYNGGRTPNITCFREQYHSRFMVLDGTGIV
Physico‐chemical
properties
protein length:238 AA
molecular weight: 25624,73070 Da
isoelectric point:6,04314
aromaticity:0,12185
hydropathy:0,13067

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO23860.1
1 238
Domain Start End Length (AA) Confidence
N-terminal 1 14 14 0,9817
Central domain 15 213 200 0,0020
C-terminal 214 238 24 0,9981
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-14
Central
15-213
C-terminal
214-238

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage phiBtTUL1a
[NCBI] 		3075856 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia thailandensis
[NCBI] 		57975 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO23860.1 [NCBI]
Genbank nucleotide accession
OR360541 [NCBI]
CDS location
range 25177 -> 25893
strand -
CDS
ATGCCGGTAGGATTTCAGGCATTCACTGATACCGGTGTGTATCAGATCGACGGGCGAACGCCGAACTATCAGATGGTGCAGTCGATGGCGGCGGATTCTGCGGTCGGCTCGTTGCCTTTGGCGATGAACGATGCTGGGAAGCCATTCACGATAAGTCTTCCACATGCGACGTTCACTTTCTCGTCAGTGGCTGGTCCGATGTACGCGGTACTCGCATCTGGCGCAGTGGGAATCACGCTGTGGAGTGCGAAGCGAAATGGAAGTTCATATTCCGTGACGTTTGTCACCGAGCGGCCATGTAACGTCCGACTGTTCGTGTTCGACCAAGTGCCCGTCGCTGCGGGAAACTTCGGGTTACAGGTCTTCGATGCAGGCGGGCGATTGGTCGCGGATTCGTCGAAGCCGTTTCTCCGGGTCCTCGACGTGATCTTCGAGGATTACATGAACGGTGTTGGGTGGACAGTCGAGGGCGCACCTTCGCCGCCGTGGCATTCTCGGTCGTACGGCGTGCCAGTTCTGATTTCCGCCATCTACTCCGTTCATCGAGCGTGGAGCTATGACCCGGGCGTGGTTGAGCTCTCGTCGATTCGCGTTGATGGTGGGAATGTGTCTTGGGGAACTGCACTGTACAACGGTGGGAGAACGCCGAATATCACATGCTTTCGCGAGCAGTATCACTCGCGATTCATGGTGCTTGACGGGACGGGAATCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a81cb60dad78b095adb5c8d0e1adc1e6bde7291d77d390f909852ea117155c08
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comprehensive study of prophage islands in Burkholderia pseudomallei Cpmplex (BPC) Akaphan,P., Khrongsee,P. and Tuanyok,A. 2024-04-29 — GenBank