Protein

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Genbank accession
AUG88525.1 [GenBank]
Protein name
putative head closure protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRATWHSNEPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAYDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKVSEHGCSSPNSVVVIDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETDEEVTVDSEQVTVTGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDDEFVDWKSVDGVGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRSHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV
Physico‐chemical
properties
protein length:771 AA
molecular weight: 85278,11840 Da
isoelectric point:4,83543
aromaticity:0,11025
hydropathy:-0,27730

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUG88525.1
1 771
Domain Start End Length (AA) Confidence
N-terminal 1 173 173 0,9241
Central domain 174 372 200 0,5519
C-terminal 373 771 398 0,3108
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-173
Central
174-372
C-terminal
373-771

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage TC6
[NCBI] 		2060947 Uroviricota > Caudoviricetes > Zobellviridae > Paundecimvirus PA11 >
Host Pseudomonas aeruginosa PA1
[NCBI] 		1279007 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUG88525.1 [NCBI]
Genbank nucleotide accession
MG676466 [NCBI]
CDS location
range 10548 -> 12863
strand +
CDS
ATGGCAAAGACGACTAACGCTGCCGAGTTTAACACTTTTGTTGGGGGGCTAATCACCGAGGCTAGCCCCTTAACTTTTCCTCAAAATGCCTCCATTGATGAAGTCAATTTCATTCTTAACCGAGATGGGTCTAGAAACAGACGCAACGGTATGGACTTTGAAAATGGCGCCACTAAAGTTGTATGCAACACGTTAGTTCCAGCAGATGGCACTATTGCCGTTACCTCACATAACTGGGAGAATGCTGGTGGTGAAGTTGGTAGATGGATTAGCCTTGTGCAGGTAGGCACGGAGTTGAAGTTTTTTCAGACTACTGGAGAGACACTATCCGAGGGCAACTTCTACAACTACCAGTTTGTTAATATGTCTCCAAGTCATAAACTCTCTTATGCTGTCGTAGACGGTTTGCTGGTAGTAGCTAACGGTAGTAGAGATATTTATGTCTTCGAATACGACAGCGGCTCTGTTAGCGTAACAACCAAAAGACTGTTAGTTAGAGATTTGTTTGGCGTCCAGGATATTGTGAATGGCGTTGATCTTAGGCAAGGCAACGACATTGCAACCAGACCGACTGTTCAAACTAACGCTCATATCTACAACTTGAGAAACCAGACGTTTGGTGTACCAAGGGCGACCTGGCATAGTAACGAACCGTCTGATCCTATTGTAACTTTTAGATCAGCAGCTTCTGGTAAATTTCCATCCAACTCTGACTCTGTGAATTTGGCACTGTCCAAACGTGCAGATGTTGAGCCAAGCACTACTGATAGATTTAGAGCCGAGGATATTGTACTCAACCCAATCGGTACATATGAGACAGCTAGAGGCTTCTTTATCATTGATGCAATGGCTCGTGGTAAAAGTAGACTAGAAGAAATAGTGAAGCTGAAGCAGAGATACCCTTCTTTGTCTTTTGGCGTGTCTTCTTTGCCACAAGATGAAACCCCAGGTGGAGCTAGTGTAGTTTGTGAATACGCTGGCAGGGTTTGGTATGCTGGTTTCTCTGGTCAGATTATTGATGGTGATGATCAATCACCTAGACTTGTTTCCTACATTTTGTTTAGCCAATTGGTAGATAGCCCAGCAGATATTGTGAACTGCTACCAAGATGGCGATCCTACCAGTACAGAAGAGCCAGAACTAGTAGATACTGATGGCGGATTTATTCGTATCGAAGGCGCCTACGACATTATCAATTTGGTCAATGTCGGAAGTGCTGTAATGGTAGTGGCAGCTAACGGTATATGGATGATCCAAGGTGGTAGTGACTATGGATTCACTGCAACCAACTACCTTGTTACTAAGGTTAGTGAGCATGGCTGCTCTTCTCCTAACTCCGTAGTGGTTATTGATAACAGTTTCATGTATTGGGGTGATGATGGTATTTACCATTTGACCAGAAACCAATACGGTGACTATGTAGCAAACAACCTCACTGAGAAGACCATTCAGAAGTATTATGAAAAGATTCCATCTGATGCTATTCTAAACGCTACTGGTTTTTATGACAGTTACGATAAGAAAGTTAAATGGCTTTACAATACTGTCTTGGATGGCAGGACTGAGCCAGTCACTGAGTTAGTTTTTGATCTTGCCTTGGGTGCGTTCTATCCATCTAAAATTGGAAGCTTGACTGCTGGTAGGTTGCCAATTCCTGTAGGCTCTGTAAAAATTCCACCCTACAAATTGGTGGAGACTGACGAAGAAGTAACCGTAGACTCTGAGCAGGTAACTGTCACTGGGGAATTGGTCACCGTTAAGGTTAGCACTAGATCGCCAGTAATCAGGGAAACCAAATACATCATTGTAGAAAAGTTGTCCTCACCTATGCGTATCAGCTTTGGTGGGTATACAGATGATGAGTTTGTTGACTGGAAGTCGGTTGACGGTGTAGGAGTCGATGCACCTGCTTATCTGTTGACAGGGTATCTGGCTGGTGGTGATTATCAAAGAGAAAAGTTTGTCCCATACATCACTTTCCACTTCAAGAAGACTGAGGATGGTTTTGTAGAAGACGCTGAAGGTGATTGGACACCAACCAACCAATCCTCGTGTATGGTTCAGAGTCAGTGGTCTTGGACTAACTCTCCGGCCTCTAACAAATGGGGTAGGACTTGGCAAGCCTACAGATTTAGAAGCCACTTTTTCCCAGACAACATCGATAACCAATTTGATGATGGCAACTCTGTAGTAGAAACCAAAAGCAGATTGCGGGGAAGTGGTAAAGTCTTGTCTTTGTATATCACTACTGAGCCTAAGAAGAACCTTCACATTTATGGTTGGTCTATGTTGGTGGATGTAAATGGAACAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c899e3a0662636ef7b503c19af1271363b41e37c1aae10d489942e3f602db78e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6333
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic identification of Pseudomonas aeruginosa phage TC6 Lu,S., Tang,C., Deng,C., Zhang,Y. and Xiao,C. 2018-10-25 — GenBank