Protein

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Genbank accession
YP_009834625.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MADLKSSSTAGGGLVWTQTNLPFSPQDVKLFYNGNEVIDSVSNQSIGGDKTFTGTLTYKTPVNSNEVAIKGYVDNLDSTSVKSVTGTLPIVVTTGVSPRVSINNATQSAHGAMSKEDKTKLDGLPVRAVNRDGDTMTGNLMVNGQVEANRIKSNGQVEVYDSATNTYAQRLVASGSLLYFQGGKVDRDVTDQRIAFSGWYGTPLTQVRFNMAAGVNPQVSYGNTNYDIFHKGNLPSAEEVKAMAVYDRPPEDDCDKAIMPGNYGVFANTKNTPVAGGIGPSGSTLLVTRWGNGANAQIFFSYTENRVWVRRQYIGVWQPWAEMYTSLNKQPVGGMGLGVGDSPNAITVTGGVRDFNLIKTNGVFTVDGNWANGTDNTATATTHTGIVEVKQRSFDNLTVQKFSNWVTVGGFVEPREFTRVWINAVEGWQPWLPTGVWEQVNTYRTGILRHNNSTNDDSVYPYVSYTKEKYRDGVAAGIPYTIGEVSFRVGATNRYDPHSGDQLSRIIGQATNTTTTGEYEGTLFLASRYRKGSDGSTADTSTLRISRDVGAEFTHAGKKVQIETGNVNAEKFIVTTTGYALQYSGNANQGIYLDNRTIIGGGSSGVVIRPNGSGTVTGETVFNANGTISNNQVPTLAMHLTNKAYVDGVALGGFSSIITLRDTDNLNDIKTAGIYSQVANAKALTSLNYPVEKAGNLIVTTSAGVIQKYWVYNSSEVWSRAQYSSGAWKPWYRDYNEEFKPTSADVGALSLTGGTVTGDVRFNSGNTTRLTLGSGSDYYVERSPSGLTLASGTINPKVKVNNTDYDIYHTGNKPSAADVGTLTTTQINTELNKKLNLSGGIMTGAIRWDATDEYINAASNNIYLAAKTGTVYLESKNNPMVRIGSNDYTIYHTGNKPSAGDFNAYTKTETDNLLNTKLNLSGGTLTGAVTTATIKNAVMINNGASISFQDGANARFHILTEGNTFKLKHGDNADNQLLYVSPTVMELQTQLSARTAMFVSGADGTRVFGIGAQESNGINPYVYVRRSGDTGNIRVLTFDQGEIIANQDRIAAPTFRVINNAGLQFSPNSNRSGVTWGMGMDLSNGNLGIHRYQDGVWNLQPFMIGSNGVVTMSTGFNTTSGTMSGSLSVNGNIEVGGSVGVNSGYASIISNNNNRLEFHRPGFWATMIYMNTDGQLRFTSSNGAGGETKLRMSIDNNGNTGIAGSVNANGGVHDVGQRVYSPSNPIPDGVILRSVVNGGGNMDIGSYAMVTVKSNLGPQGPGTVLQGTQIAFSNAEGTNMVACNYGTWRLMGVSRANSQNGDGWGSWNVTLAQRIT
Physico‐chemical
properties
protein length:1316 AA
molecular weight: 140946,60990 Da
isoelectric point:6,94597
aromaticity:0,08739
hydropathy:-0,34772

Domains

Domains [InterPro]
DC_0505
ATT
1–506
DC_0505 DC_1909 DC_1924
cd19958
STR
260–324
cd19958 cd19958 DC_1142
YP_009834625.1
1 1316
Architecture
ATT
STR
RBD
ATT 1-506 | STR 594-953 | RBD 1068-1316
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009834625.1
1 1316
Domain Start End Length (AA) Confidence
N-terminal 1 571 571 0,2488
Central domain 572 770 200 0,2163
C-terminal 771 1316 545 0,7346
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-571
Central
572-770
C-terminal
771-1316

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS-zj
[NCBI] 		2024208 Uroviricota > Caudoviricetes > Pantevenvirales > Emmerichvirinae > Ceceduovirus
Host Aeromonas salmonicida subsp. salmonicida
[NCBI] 		29491 Bacteria > Proteobacteria > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009834625.1 [NCBI]
Genbank nucleotide accession
NC_048673.1 [NCBI]
CDS location
range 158493 -> 162443
strand +
CDS
ATGGCAGACCTTAAGAGTTCGTCTACCGCTGGGGGTGGATTAGTTTGGACACAGACTAACCTACCATTTTCCCCGCAAGACGTTAAGCTGTTTTATAATGGTAATGAGGTTATTGATAGTGTTAGTAATCAATCTATTGGTGGGGATAAAACCTTTACCGGAACATTGACATATAAAACTCCTGTCAATTCTAATGAAGTTGCCATTAAAGGTTATGTTGATAACCTAGATAGTACATCGGTGAAATCTGTAACCGGGACTCTCCCAATCGTCGTTACTACTGGTGTAAGTCCGCGAGTTTCAATTAATAACGCAACGCAATCCGCCCATGGGGCAATGAGTAAAGAAGACAAAACAAAACTTGACGGTTTGCCTGTTCGAGCTGTTAATAGAGATGGTGATACCATGACTGGAAACCTAATGGTTAATGGTCAGGTTGAAGCAAATAGAATCAAGTCCAACGGTCAAGTTGAAGTTTATGATTCTGCTACCAATACATATGCACAACGTCTAGTTGCATCTGGTTCCTTACTTTATTTCCAAGGTGGTAAAGTAGATAGAGACGTTACGGATCAACGAATTGCTTTTAGTGGTTGGTATGGTACACCACTAACTCAAGTAAGATTTAATATGGCTGCCGGGGTTAATCCTCAAGTATCTTATGGAAATACAAACTATGATATTTTCCATAAAGGTAATTTGCCTAGTGCGGAAGAAGTAAAGGCAATGGCGGTATATGATCGTCCACCAGAAGATGATTGCGATAAAGCAATTATGCCCGGTAACTATGGTGTTTTCGCCAACACAAAAAATACTCCCGTTGCTGGTGGTATAGGACCTAGTGGTTCAACCCTCCTTGTTACTCGTTGGGGTAATGGGGCAAACGCACAAATATTCTTTTCTTATACTGAAAACCGTGTATGGGTGCGCAGACAATATATCGGTGTTTGGCAGCCATGGGCTGAAATGTATACCTCTCTGAACAAACAGCCGGTGGGTGGTATGGGTCTTGGTGTTGGTGATAGCCCCAACGCGATCACAGTAACCGGTGGTGTTCGTGACTTCAACCTAATTAAGACCAACGGTGTTTTTACAGTTGATGGTAACTGGGCTAATGGAACTGACAATACCGCAACTGCAACTACTCATACGGGTATTGTTGAGGTTAAACAACGATCTTTCGATAACTTGACTGTTCAGAAATTCAGTAACTGGGTAACAGTCGGTGGATTTGTAGAACCAAGAGAGTTTACAAGGGTATGGATTAATGCAGTTGAAGGTTGGCAACCATGGTTACCGACTGGTGTGTGGGAACAGGTAAACACATATAGAACTGGTATTCTAAGACACAATAACTCTACTAATGACGATTCTGTTTATCCTTACGTATCTTATACCAAGGAAAAATATCGTGATGGTGTTGCTGCTGGTATTCCATACACAATAGGTGAGGTTAGTTTTAGAGTTGGTGCTACAAACCGATATGATCCCCATAGTGGCGATCAGTTGTCTAGAATTATAGGTCAAGCAACAAACACAACCACAACCGGTGAATATGAAGGTACTTTGTTCTTAGCTTCTAGATATCGCAAAGGGTCTGATGGTTCGACTGCTGACACTAGTACACTAAGAATAAGTAGAGATGTTGGTGCTGAATTTACCCATGCAGGTAAGAAAGTACAGATCGAAACCGGTAATGTGAATGCAGAGAAATTTATTGTAACCACAACTGGTTATGCACTTCAATATTCCGGTAATGCAAACCAAGGAATCTATTTAGATAATAGAACAATTATTGGTGGTGGTTCATCTGGTGTTGTGATTCGTCCAAATGGTTCGGGAACTGTAACTGGGGAAACTGTCTTTAATGCAAACGGTACTATATCAAATAACCAAGTTCCGACGTTGGCAATGCATTTAACAAACAAGGCATATGTTGATGGTGTTGCTCTTGGTGGTTTTAGTTCTATTATCACACTGAGAGATACAGATAACCTCAACGATATTAAAACCGCTGGTATATATAGCCAAGTTGCTAACGCTAAAGCATTAACTAGTTTGAACTATCCAGTTGAGAAAGCTGGTAACCTTATTGTTACTACTTCCGCTGGCGTTATTCAAAAATATTGGGTATATAACTCGTCCGAAGTTTGGTCTAGAGCACAATATTCAAGTGGTGCGTGGAAGCCTTGGTATCGTGACTATAACGAAGAGTTTAAACCTACTTCCGCTGATGTTGGGGCGTTGTCTTTAACTGGTGGTACTGTAACTGGGGATGTTAGATTTAACTCTGGCAACACCACTAGATTGACTCTTGGTAGTGGTTCTGATTATTACGTCGAACGCTCACCATCTGGATTGACATTAGCTTCTGGAACTATCAATCCGAAGGTTAAAGTTAATAACACAGATTATGACATATATCATACCGGCAATAAACCATCAGCCGCCGACGTTGGTACATTAACAACTACACAGATAAACACAGAGCTTAACAAAAAGCTTAATCTGTCTGGTGGTATCATGACTGGCGCAATTCGTTGGGATGCAACAGATGAATATATCAACGCCGCGAGCAACAATATATATCTGGCTGCTAAGACTGGTACTGTATATCTTGAAAGCAAAAATAACCCAATGGTAAGGATTGGAAGTAACGATTACACCATATATCACACTGGTAATAAACCTTCTGCTGGTGATTTTAATGCATACACAAAAACTGAAACAGATAATTTACTTAATACTAAATTAAATCTGTCTGGTGGCACTCTAACTGGAGCGGTAACTACTGCAACCATAAAGAATGCTGTTATGATTAATAATGGTGCATCGATTAGTTTCCAAGACGGAGCTAATGCTAGATTCCATATACTGACAGAAGGTAACACCTTTAAACTAAAACATGGAGACAATGCCGATAATCAGCTACTATACGTTAGCCCCACAGTAATGGAATTACAAACACAATTAAGTGCAAGAACTGCAATGTTTGTGAGTGGAGCTGATGGAACTCGGGTGTTTGGGATTGGTGCTCAAGAATCCAACGGAATAAACCCATACGTGTATGTACGAAGATCTGGTGATACTGGAAACATACGTGTTCTGACATTTGATCAGGGTGAGATTATTGCTAACCAAGATCGAATCGCTGCTCCAACTTTCCGAGTTATTAACAACGCAGGATTACAGTTCTCCCCAAATAGTAACCGGAGTGGTGTGACTTGGGGGATGGGTATGGATCTATCTAATGGTAACCTTGGTATCCATCGTTATCAAGATGGTGTATGGAATCTCCAACCATTTATGATAGGTTCGAACGGTGTGGTTACTATGAGTACGGGTTTCAACACAACCAGCGGAACAATGTCTGGTTCCCTAAGTGTTAATGGAAACATTGAGGTTGGTGGATCTGTAGGTGTTAATAGTGGTTATGCCTCTATCATTAGCAATAATAATAACAGACTAGAATTTCATCGTCCCGGATTTTGGGCAACAATGATTTACATGAACACAGACGGTCAACTTCGATTTACATCAAGTAATGGTGCCGGTGGTGAAACTAAACTCAGAATGTCTATTGATAACAATGGTAATACCGGAATAGCAGGTTCTGTTAACGCTAATGGTGGTGTTCACGACGTAGGTCAACGAGTTTATTCACCAAGTAACCCAATTCCAGATGGTGTAATACTGAGATCAGTCGTCAACGGCGGCGGCAATATGGATATTGGTTCATATGCGATGGTCACAGTCAAATCCAACCTTGGTCCACAAGGTCCGGGGACTGTTCTCCAAGGTACTCAGATTGCATTCTCGAACGCGGAAGGTACTAATATGGTTGCCTGTAACTATGGTACATGGCGTCTGATGGGTGTTTCTAGAGCAAATTCCCAAAACGGCGACGGTTGGGGTTCTTGGAACGTAACATTGGCACAGCGGATAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8f99a9094d951648fffa8d01ef3455a7c297a86b6e8f6748d0ab395b086a0da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In vitro design and evaluation of phage cocktails against multidrug-resistant Aeromonas salmonicida Chen,L., Yuan,S. and Ma,Y. 2018-07-06 — GenBank