Protein

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Genbank accession
YP_010655183.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNFANLQADALSVDGFANQNGLIPTRYGGNKKSWQYLVDQFEAEFAEQLLEINKSRGYRVVGTFAAGFEYELFNDVGIDASGNSWIYVGDGAPVATVAPGTDPSLSADYQQVTFNSIDGVVGLRDELNDRALYLTLAQAQASDLKVGQYVRLTDRDNPLYKVQPVGLVANGMDVVGLPNGTSLEYVRGQGDNAVHIGAVGDGVFDNTDVLTRAVDIFRNTYLPDGTYAIESVIRKSGPNPIQRQITGQSQDGTVIKALPSLTNSALVWFGNSTGYGVQYTHIKNLTIDGTDKAQNCTGILYQSCGLSSVKNVTFRNLGRTFWGLGCIDTHLIDCDHFNYTQGPYWTVYAQGETNGDLDDLNNQQTQTTNANSSSMVRNWISSGDLTATYISGAQFRLDGCLYQSATNDDTQTNDLIVIENSNEAYDYGAGPIIEGCWTEGGKYRFACSIINTRQTRLFKNIFNGAFNNTDKLFEGGVHADANSVENLVAKYNTFRGYFDSPPTEGRSGNGCIYLQNSNTNYTADVKDNYITYNTTNIYWEGMNNPAVDRSPLNMFATISGLTTTPSVDFASSNFISSVVVNGTGDITFIYSFNRQALPDGGFYPVMLTCHTSGGAVTYPAGHLVSNANSDRFIFNDDSGSPATPVGVTIHLLGGGWV
Physico‐chemical
properties
protein length:658 AA
molecular weight: 71445,91050 Da
isoelectric point:4,55965
aromaticity:0,10942
hydropathy:-0,27964

Domains

Domains [InterPro]
IPR012334
STR
191–327
IPR012334
IPR012334
STR
191–335
IPR012334
IPR024535
ENZ
193–317
IPR024535
IPR011050
STR
195–345
IPR011050
IPR011050
STR
222–571
IPR011050
YP_010655183.1
1 658
Architecture
STR
STR 191-571 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010655183.1
1 658
Domain Start End Length (AA) Confidence
N-terminal 1 208 208 0,9929
Central domain 209 555 348 0,9896
C-terminal 556 658 102 0,9821
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-208
Central
209-555
C-terminal
556-658

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage TW1
[NCBI] 		1366055 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas phenolica
[NCBI] 		161398 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010655183.1 [NCBI]
Genbank nucleotide accession
NC_070822.1 [NCBI]
CDS location
range 11993 -> 13969
strand +
CDS
ATGACTAATTTCGCAAACTTACAAGCTGATGCGCTGAGTGTTGACGGCTTTGCCAATCAAAACGGTTTAATACCAACTCGCTACGGCGGCAATAAAAAATCTTGGCAGTATTTAGTTGATCAATTTGAAGCTGAATTTGCTGAACAACTATTAGAGATTAACAAATCGCGCGGCTACCGTGTTGTTGGTACTTTTGCAGCTGGTTTTGAATACGAGTTATTTAACGACGTTGGCATCGACGCAAGCGGTAACAGTTGGATTTATGTTGGCGATGGTGCACCAGTGGCTACGGTTGCACCTGGCACAGATCCAAGTTTAAGCGCAGATTATCAGCAAGTAACTTTCAATAGTATTGACGGCGTTGTGGGTTTGCGTGATGAGCTTAATGACCGAGCGCTTTACTTGACGCTTGCACAGGCTCAAGCTAGTGATTTGAAAGTTGGGCAGTATGTAAGATTGACTGATAGAGATAACCCTCTTTATAAAGTTCAACCTGTCGGACTTGTCGCAAATGGAATGGACGTTGTTGGATTACCGAACGGTACATCGTTAGAGTACGTAAGAGGGCAAGGTGATAACGCTGTGCACATCGGAGCTGTTGGTGATGGGGTGTTCGACAACACAGACGTACTCACGCGGGCAGTGGATATATTCAGAAATACTTACTTACCGGATGGTACATATGCGATAGAATCAGTCATTAGAAAGAGTGGTCCAAACCCAATACAGAGGCAGATAACAGGCCAGTCACAAGATGGTACGGTTATAAAGGCACTACCATCATTGACAAACAGTGCACTTGTTTGGTTTGGTAACTCTACTGGTTATGGAGTGCAATATACACACATAAAGAATTTGACGATAGACGGTACGGATAAAGCGCAAAACTGTACAGGTATCTTGTATCAGTCGTGCGGCCTTTCTAGTGTAAAAAATGTGACGTTCCGAAACTTAGGCAGGACTTTCTGGGGTCTTGGTTGTATTGATACGCACTTAATAGACTGCGACCACTTCAACTATACTCAAGGACCTTACTGGACTGTATACGCGCAAGGCGAGACCAATGGGGATTTAGATGATCTTAACAACCAACAAACTCAGACTACCAATGCTAACAGCAGCTCAATGGTAAGAAACTGGATTTCGAGTGGTGACTTAACAGCAACGTATATAAGCGGCGCACAGTTTAGACTAGACGGTTGTTTGTACCAGTCTGCAACTAACGACGATACACAAACAAACGACTTGATTGTAATTGAGAATTCAAACGAGGCATACGACTATGGTGCAGGTCCAATAATAGAAGGTTGCTGGACAGAAGGCGGAAAGTACCGATTTGCTTGCTCTATTATAAATACAAGGCAAACAAGGCTCTTTAAGAACATATTTAACGGTGCATTCAACAATACAGATAAGCTTTTCGAAGGTGGTGTACACGCTGACGCTAACTCCGTTGAGAATCTGGTAGCGAAATACAATACGTTTAGAGGTTATTTTGACTCGCCACCAACGGAGGGGAGATCTGGTAACGGTTGTATATACCTCCAAAATAGTAACACTAATTACACCGCTGACGTTAAAGATAATTACATCACGTACAATACTACTAATATTTATTGGGAGGGAATGAATAACCCAGCGGTAGACCGTAGTCCTCTTAATATGTTTGCAACTATAAGCGGTTTGACAACAACCCCTAGCGTTGATTTTGCAAGCTCAAACTTTATTAGTAGCGTTGTAGTAAATGGTACAGGGGATATAACCTTTATCTACAGTTTCAATAGGCAGGCTTTACCAGACGGCGGATTTTATCCTGTTATGCTCACTTGCCACACAAGCGGCGGAGCAGTAACGTACCCCGCAGGGCACTTGGTTAGTAATGCCAACTCAGATAGGTTCATCTTTAATGATGATTCAGGGAGTCCGGCGACGCCCGTGGGAGTTACGATACATTTATTAGGCGGCGGATGGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b558d968e814b8406cb76d6fae85a28ffcb6dee415dfa9f8880cc7fef7629815
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7951
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50