Protein

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Genbank accession
XTK85252.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVSDPVRGVARRWGSVFLDSREVRDTEMSESDMKKAVNLYREAEYTCDGRDLVVLYAKGDVRPYGLPPVMAYDITQKKTLNVVGEGNLYDALRANGAASRANVGRFLYVAVNNFVTTFSVSDNIGAPLAARGGAVWVRQGNFSRPYAMTVVNTDGSTRTFTYTTPAASYPGKLDTSDIPIPDVPQGDPSNADLQAYQKALAEYNKLISDRTNAYNSAVTSWIGEATEKMQPAYIANQLAQQMTDAGYTNVWPNGAYVTWNNSAGIADVVMPENSDGTFMRAVAYQVDEATNLSPKHWVGQVVKVSAKKQDQKDAYYMQAYRKSSDTEAFTDVIWRETAGQRTKPGDIFLHCWADLNTLYIGSSPAGLNGLAPDAEAPGYEDSSVGDALSSPAPGFFGKAINYLGVFQDRLLISSGAVVFASRPGDYLNWFRKTVLDVIDNDPMEMYALGSEDDTISWDTTFDRNLVLFGRKNQYIIPGRQTMSPKSPYIQIMSSIKDTVLAEPKASGSYVFYGKDTSVKGSVHQIQIGAVSDSSDSYEISQALDNYLSGRPVQLVTIQSPNNVVVRTTDYNYGLYVYTYLQNMNGGERVFDSWSRWEWPKALGMCLGMCDDDGALLVFKLRNIDGKTALQAERFSFETELPDTGYLDCNRPMDLNVPREAGRAAHYIGGHEYFLLGSRLDKIDSNMSWWEEDLAYLRTGFVTDAYVVPTAPYMRDRNDNPITTGRLTLGSFKVNVEQTAGLYGSVTTADRTYEMVDYGGRLLTRKSNQVGRVPLVDTSLSVPVYREIREFQLKLQARDWLPLTITGLEWVGQWFNRTQRV
Physico‐chemical
properties
protein length:820 AA
molecular weight: 91222,16720 Da
isoelectric point:5,08416
aromaticity:0,10976
hydropathy:-0,36573

Domains

Domains [InterPro]
DC_0058
STR
1–820
DC_0058
IPR058003
TTP
112–619
IPR058003 IPR058003
XTK85252.1
1 820
Architecture
STR
STR 1-820
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTK85252.1
1 820
Domain Start End Length (AA) Confidence
N-terminal 1 124 124 0,9414
Central domain 125 323 200 0,4259
C-terminal 324 820 496 0,1133
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-124
Central
125-323
C-terminal
324-820

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Ptacy1537
[NCBI] 		3394248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTK85252.1 [NCBI]
Genbank nucleotide accession
PQ863254 [NCBI]
CDS location
range 30056 -> 32518
strand +
CDS
ATGGTGAGTGACCCCGTTCGCGGGGTTGCTCGTCGTTGGGGTTCTGTGTTCCTGGATAGCCGCGAAGTCCGAGATACAGAGATGTCTGAATCGGACATGAAGAAGGCAGTAAACCTGTACCGGGAAGCCGAGTACACGTGCGATGGCCGCGACTTAGTTGTGCTGTACGCAAAAGGAGATGTACGACCGTACGGATTGCCACCAGTAATGGCCTACGATATCACTCAGAAGAAAACGCTGAATGTTGTTGGGGAGGGTAATCTGTACGACGCTCTCCGGGCTAACGGTGCTGCATCTCGCGCTAACGTTGGACGTTTCTTGTACGTGGCGGTAAATAACTTTGTCACTACGTTCTCTGTGTCAGACAACATTGGTGCTCCGCTGGCGGCACGTGGAGGGGCTGTATGGGTGCGGCAGGGTAACTTCTCCCGCCCGTATGCAATGACCGTGGTAAATACCGACGGCAGTACCCGAACATTCACGTACACAACACCGGCAGCATCCTACCCCGGTAAGCTGGATACGTCGGATATTCCAATCCCAGACGTACCGCAGGGCGACCCTTCAAATGCGGACTTGCAGGCGTACCAGAAAGCCCTGGCTGAGTACAACAAGCTCATCAGCGACCGCACCAACGCCTACAACTCAGCTGTAACGAGTTGGATTGGTGAGGCTACTGAGAAGATGCAGCCCGCGTACATCGCGAACCAGCTTGCACAGCAGATGACGGATGCCGGGTACACAAACGTCTGGCCTAATGGGGCGTACGTAACGTGGAATAATAGCGCAGGTATCGCTGACGTTGTAATGCCGGAGAACAGCGACGGGACGTTCATGCGGGCTGTGGCTTATCAGGTAGACGAGGCAACTAACCTTTCACCTAAACATTGGGTTGGGCAGGTTGTTAAGGTCTCGGCCAAGAAGCAGGACCAGAAGGACGCCTACTACATGCAGGCGTACCGCAAGTCAAGTGACACAGAAGCATTCACGGACGTTATCTGGCGTGAGACCGCAGGGCAGCGGACCAAGCCAGGAGATATCTTCCTGCACTGCTGGGCAGACCTGAACACCCTGTACATCGGGAGTAGCCCTGCTGGACTGAATGGCCTGGCACCTGACGCCGAGGCTCCGGGGTACGAGGACAGCTCGGTAGGTGATGCGTTGTCATCACCGGCACCCGGATTCTTTGGCAAGGCTATTAACTACCTGGGCGTGTTCCAGGACCGTCTGCTGATTAGCTCCGGTGCAGTGGTGTTCGCCAGCCGACCGGGCGATTATCTAAACTGGTTCCGCAAGACTGTTCTGGACGTTATCGACAACGACCCTATGGAGATGTACGCCCTCGGCTCAGAGGACGACACCATTTCCTGGGACACTACGTTTGACCGCAACCTGGTATTGTTTGGGCGTAAGAACCAATACATTATCCCAGGGCGGCAGACAATGAGTCCTAAGTCGCCGTACATTCAGATTATGTCGAGCATCAAGGACACCGTGCTGGCTGAGCCTAAGGCCAGCGGAAGTTATGTGTTCTACGGCAAAGATACCTCTGTGAAAGGTAGTGTGCACCAGATTCAGATTGGTGCCGTATCCGATAGCTCCGACAGCTACGAGATTAGCCAGGCCCTGGATAACTACCTGAGCGGGCGTCCTGTACAGCTGGTGACTATACAGTCACCCAACAATGTGGTAGTGCGGACAACGGACTACAACTACGGGTTGTACGTGTATACCTACCTTCAGAACATGAACGGCGGCGAGCGTGTCTTTGACAGCTGGTCTCGCTGGGAGTGGCCAAAGGCCCTGGGTATGTGTCTGGGTATGTGTGACGACGACGGGGCGCTGTTGGTATTCAAGCTGCGTAACATTGACGGAAAGACAGCTCTACAGGCGGAGCGCTTCAGCTTCGAGACGGAGTTGCCGGATACCGGGTACTTGGACTGCAACCGGCCTATGGACCTGAATGTCCCGAGAGAAGCTGGGCGGGCTGCGCACTACATCGGCGGCCACGAGTATTTCTTGCTGGGTTCCCGTCTGGATAAAATTGACAGTAATATGTCCTGGTGGGAGGAGGACCTGGCCTACCTCCGTACGGGATTCGTAACTGATGCCTATGTGGTGCCTACCGCGCCGTATATGCGGGACAGAAACGATAACCCCATAACAACAGGCCGCCTGACCCTGGGCAGCTTTAAGGTTAACGTCGAACAGACAGCCGGGCTGTATGGCTCTGTAACGACCGCAGACCGCACTTACGAGATGGTTGACTATGGTGGGCGCTTGCTTACCCGTAAGTCGAACCAGGTGGGTCGTGTACCGCTTGTCGATACTTCCCTCTCAGTCCCGGTGTATCGGGAGATTCGTGAGTTCCAGCTGAAGCTACAGGCACGCGACTGGCTCCCTCTGACCATTACTGGCCTTGAGTGGGTTGGTCAATGGTTCAACCGCACTCAGAGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e672fe66132926f57af5139051d13981b267e6144195272cde86b51d51be2d1d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2987
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New APEC-specific bacteriophages Petrzik,K. 2025-03-14 — GenBank