Protein

View in Explore
Genbank accession
WVL95660.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPTRSPEIITRASEVDEDLVPEPWDPRDADSDRSLVAERERYRLQGATDGQGAGIVPAYNLNVADTGSIPSNTQDGWTRGSAGRVLGPDGKYVSRGSDVPRKSFDGEEPGLLVEAAGRTNHVTDSSDLSAGWATFGTSNSAASNLIEGESA
Physico‐chemical
properties
protein length:151 AA
molecular weight: 15933,96340 Da
isoelectric point:4,41744
aromaticity:0,05298
hydropathy:-0,66755

Domains

Domains [InterPro]
DC_1416
STR
17–151
DC_1416
WVL95660.1
1 151
Architecture
STR
STR 17-151
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVL95660.1
1 151
Domain Start End Length (AA) Confidence
N-terminal 1 52 52 0,3066
Central domain 53 140 89 0,7553
C-terminal 141 151 10 0,9773
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-52
Central
53-140
C-terminal
141-151

Taxonomy

  Name Taxonomy ID Lineage
Phage Salinibacter phage 13_4
[NCBI] 		3113408 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVL95660.1 [NCBI]
Genbank nucleotide accession
OR896211 [NCBI]
CDS location
range 46212 -> 46663
strand +
CDS
ATGCCAACACGCAGCCCTGAAATCATCACCAGAGCAAGCGAGGTAGACGAGGACCTCGTGCCCGAGCCGTGGGACCCCCGCGATGCTGACAGCGACCGATCCCTCGTGGCCGAGCGGGAGCGGTACAGGCTCCAAGGCGCGACAGACGGGCAAGGCGCGGGGATCGTGCCTGCCTACAACCTCAACGTCGCGGATACCGGATCTATACCGTCGAATACGCAAGACGGCTGGACACGCGGCAGCGCGGGGCGGGTGCTTGGGCCAGATGGCAAGTACGTGTCACGCGGGAGCGACGTGCCGCGCAAGAGCTTCGATGGCGAGGAGCCGGGGCTGCTCGTGGAGGCGGCGGGGCGGACGAATCACGTCACAGATTCCTCTGACCTTTCAGCGGGTTGGGCAACATTTGGTACGAGCAATTCAGCCGCAAGTAATTTAATAGAAGGGGAAAGTGC

Genome Context

Genome Context

Tertiary structure

PDB ID
119dd6334185b2f9a059ab5b64d630706ce1447acd267f3587a8048f8b4aaedb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3220
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Experimental evolution at ecological scale allows linking viral genotypes to specific host strains Ramos-Barbero,L., Aldeguer-Riquelme,B., Viver,T., Villamor,J., Carrillo,M., Lopez-Pascual,C., Konstantinidis,K., Martinez-Garcia,M., Santos,F., Rossello-Mora,R. and Anton,J. 2023 — GenBank