Protein

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Genbank accession
AJQ21038.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALSELVKAKSPVLLERQYLSSRIEAGALADTAIVAGLNENPGSILVVDIPVQVNSVVMPDNSTLILAAQVTHRASASGHMLIPGSACTILGLGDAGGLNGNAGNNPTQWRAVSCVNKSNVVLEDFFITNTKSAAAYFEGCTDTRTHKLRISNVVGTGEYAGGIYVTNCIRHKSSYNLIMDVNTNGIKFRADTLGLTYGCSSDHDSIYRAGFIGIANGKCQNHKVTNWYAVDCVDNGVDMNGCYDTVFDGGTSLRCQDGMYIGENNIDLCSVRNSAAIDCKRAGIGSMGSLTNCTMLDNFIDRCGSGIYASGYVGLSIRGNIIRNSSKKTYTDNETGMVKVSTGSGIDIQANLSAAYKTDIISNSFMSNAGYDVNWGVGTVADARMLDNDFVNTFGDGKVYLGSAFTNYQSKDNRGYLNEATIVLNLTGDGTTVRFQVNLPFKAANTNYTVESVVPDWTSTYRVLLVSQTTTGFLLEFGTAPPAGSTRRVVVRVTGLVQA
Physico‐chemical
properties
protein length:500 AA
molecular weight: 53301,36300 Da
isoelectric point:5,90656
aromaticity:0,07800
hydropathy:-0,04180

Domains

Domains [InterPro]
DC_1867
ATT
1–85
DC_1867 IPR012334
IPR011050
STR
61–409
IPR011050
DC_0592
RBD
340–500
DC_0592
AJQ21038.1
1 500
Architecture
ATT
STR
RBD
ATT 1-85 | STR 86-473 | RBD 474-500
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AJQ21038.1
1 500
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,9508
Central domain 32 416 386 0,9948
C-terminal 417 500 83 0,9891
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-416
C-terminal
417-500

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_SU503
[NCBI] 		1610834 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJQ21038.1 [NCBI]
Genbank nucleotide accession
KP708985.1 [NCBI]
CDS location
range 41908 -> 43410
strand +
CDS
ATGGCCTTAAGTGAACTTGTAAAAGCAAAATCCCCGGTACTGTTAGAGCGACAGTATCTCAGTTCTAGGATTGAGGCGGGGGCCTTGGCGGACACCGCTATAGTGGCGGGTCTGAATGAGAATCCAGGCAGTATCCTAGTCGTGGATATCCCTGTTCAGGTCAACTCAGTGGTTATGCCTGACAATAGTACACTGATACTGGCAGCCCAGGTAACACACCGGGCATCCGCCAGCGGGCACATGCTTATTCCGGGGAGCGCGTGTACCATCTTAGGTCTAGGGGATGCTGGTGGGTTAAATGGCAACGCCGGTAATAACCCCACGCAGTGGCGCGCGGTTAGTTGTGTAAATAAGTCCAACGTAGTTCTTGAGGACTTCTTCATAACTAACACTAAATCTGCTGCTGCATACTTCGAAGGTTGTACAGATACACGTACGCACAAACTCCGTATTAGCAATGTGGTAGGTACAGGGGAATACGCGGGCGGCATCTACGTCACGAACTGTATACGGCACAAGTCCAGCTATAACTTAATCATGGACGTAAATACTAACGGCATCAAGTTCAGGGCAGATACTCTAGGCCTTACTTACGGATGCAGTAGCGACCATGATAGCATCTACCGTGCCGGTTTCATCGGCATAGCTAACGGTAAATGTCAGAACCACAAAGTTACAAACTGGTATGCTGTAGACTGTGTGGATAACGGGGTGGACATGAATGGTTGCTATGATACTGTCTTCGATGGTGGCACTAGTCTTCGTTGTCAGGACGGGATGTACATCGGAGAGAACAACATTGACCTGTGCAGTGTACGTAATAGCGCAGCCATTGACTGTAAACGTGCGGGTATCGGCTCCATGGGAAGCCTAACTAACTGTACTATGCTGGACAACTTTATAGACCGGTGCGGCTCTGGTATCTACGCCTCGGGCTATGTAGGGCTGAGTATACGCGGCAACATTATCCGCAACAGCAGCAAGAAGACGTACACGGATAATGAAACCGGGATGGTCAAGGTTAGTACTGGTAGTGGTATTGATATACAGGCGAACCTGTCTGCCGCCTATAAGACCGACATTATCAGTAACTCTTTCATGAGCAATGCAGGGTATGACGTGAACTGGGGGGTGGGTACTGTTGCGGATGCGCGTATGCTGGACAATGACTTCGTGAATACGTTTGGTGACGGTAAGGTCTACCTTGGTAGTGCTTTCACTAACTACCAATCCAAGGACAACCGGGGCTATCTTAACGAGGCCACTATAGTGTTGAACCTAACAGGTGACGGTACTACTGTAAGGTTCCAGGTTAATCTGCCATTTAAGGCTGCTAACACCAACTACACAGTGGAGTCCGTGGTACCGGATTGGACGAGCACATACAGGGTTCTGTTAGTGAGCCAGACTACAACCGGCTTCTTACTGGAGTTCGGTACAGCTCCACCTGCTGGCAGTACTAGACGGGTGGTAGTGCGCGTTACGGGCCTAGTGCAGGCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5348d7ff493a20b32ed94593b634fb2f41128d262f8178ea20efbe2a0bf7e2b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8819
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A suggested new bacteriophage genus, Kp34likevirus, within the Autographivirinae subfamily of Podoviridae Eriksson,H., Maciejewska,B., Latka,A., Majkowska-Skrobek,G., Hellstrand,M., Melefors,O., Wang,J.-T., Kropinski,A.M., Drulis-Kawa,Z. and Nilsson,A.S. — — GenBank