Protein

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Genbank accession
YP_010678971.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MADPYLTQDIIVARIENRRGRRVNLPQPLRPGELGWCMDTKQLFIGVSDEDAVAAVELFRGEPLGSQDLVNQTLLHNIFTFVSEPTTLTDAEKQNLAELAKFPQLYYVSDTNRESINEYERNIEIIRSVKTSVLQSTGSASDIRYTLMYSWTIDSSDQYTFKFFAGCQPPDSFNLTTIANNSYIIDNTVNSAYNNGIVMDAGILFTDTVYESASLSVLINEYITTDSDKAYVTTKQNVEILTEYFKTTSSTDVIVNSPITYELEPSNSFTLVKTIDIINGGNYETSPMTFDGSVSDTFTIDYSISFDDMQGPVMGSDGRFVQTGTLNIILSKGSETVVVSDTSVEHRSSVGYDADVDFSGEYVAPNTVNITYRHNFPSRVLLKLTTKRWISWDNESVQN
Physico‐chemical
properties
protein length:399 AA
molecular weight: 44639,05190 Da
isoelectric point:4,38134
aromaticity:0,10276
hydropathy:-0,26090

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_PA5oct
[NCBI] 		2163605 Uroviricota > Caudoviricetes > Arenbergviridae > Wroclawvirus PA5oct >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010678971.1 [NCBI]
Genbank nucleotide accession
NC_071039.1 [NCBI]
CDS location
range 158939 -> 160138
strand +
CDS
ATGGCCGATCCGTATTTAACACAAGATATAATAGTAGCACGAATAGAAAACAGAAGAGGTCGTCGTGTTAACTTGCCGCAACCACTAAGACCGGGAGAACTCGGTTGGTGTATGGATACTAAGCAATTATTTATTGGCGTGTCTGACGAAGATGCAGTAGCAGCCGTTGAATTGTTTAGGGGAGAACCTCTTGGATCCCAAGATTTAGTTAACCAAACGTTATTACACAATATTTTTACTTTTGTATCGGAGCCAACTACATTAACTGATGCTGAAAAGCAAAATCTAGCAGAATTGGCTAAATTCCCGCAGCTATACTATGTTTCTGATACTAACAGAGAAAGCATTAATGAATACGAACGAAATATAGAGATTATTCGTAGTGTTAAGACGTCTGTACTTCAGTCAACAGGTAGCGCCTCTGATATTAGATATACATTGATGTATTCGTGGACTATTGATTCCTCTGATCAGTATACGTTTAAATTTTTTGCAGGATGCCAACCGCCCGATTCGTTTAATCTTACAACTATAGCTAACAATTCGTATATTATAGATAATACTGTAAACTCTGCATACAATAACGGTATAGTAATGGACGCAGGGATATTATTTACTGATACTGTATACGAATCTGCTAGTTTAAGTGTATTAATAAATGAATATATTACTACAGACAGTGACAAAGCATATGTAACTACAAAACAAAACGTAGAAATACTAACAGAATACTTTAAAACTACTAGTAGTACAGATGTAATAGTAAATAGTCCTATAACATACGAATTAGAGCCTTCTAATTCGTTTACTTTAGTAAAAACTATAGATATAATAAACGGCGGTAACTACGAAACTAGTCCAATGACGTTTGATGGTTCGGTATCTGATACATTTACTATAGATTATTCTATAAGTTTTGATGACATGCAAGGCCCAGTTATGGGCAGCGATGGCAGGTTTGTTCAAACCGGAACATTAAATATTATTTTATCTAAAGGATCAGAAACTGTAGTTGTTTCAGACACATCTGTTGAGCATAGATCTTCGGTGGGATACGACGCTGATGTAGATTTTAGTGGAGAATATGTAGCACCTAACACAGTAAATATAACATACAGGCATAATTTTCCGTCGAGGGTACTTCTTAAATTAACTACAAAGCGTTGGATTTCGTGGGATAACGAATCAGTTCAGAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d3273471afe350214c33a0ab1e8bdbd9bd2411c174dd628619d5b6486baab45b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4370
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Integrative omics analysis of Pseudomonas aeruginosa virus PA5oct highlights the molecular complexity of jumbo phages Lood,C., Danis-Wlodarczyk,K., Blasdel,B.G., Jang,H.B., Vandenheuvel,D., Briers,Y., Noben,J.-P., van Noort,V., Drulis-Kawa,Z. and Lavigne,R. 2019 — GenBank
Genomics, Transcriptomics, and structural analysis of Pseudomonas virus PA5oct highlights the molecular complexity among Jumbo phages Lood,C., Danis-Wlodarczyk,K., Blasdel,B., Jang,H.B., Vandenheuvel,D., Briers,Y., Noben,J.-P., Kawa,Z. and Lavigne,R. 2019-06-22 — GenBank