Protein

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Genbank accession
QEG05556.1 [GenBank]
Protein name
hinge connector of long tail fiber proximal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTQEIELRNTGIKFAHFDEDSATFTSISENNSVMYKLEVRGSNADSTKPARIRFNGVEIVGTGYENGLNFKVLTPTGRLHEEKVFYGRGAVLAMRDYLSLLKGDYIIAMATHGELFADPVSDDVFSKLGSVSFPNHILLQQMPRVSYAAIYSTKMGKIVCEGMQATHGEGQDSSIQIEKVYDTIDDLAITGTPQRFLDYPVEYVSEDAEHFELIQWPHDEISAPLEDFNIKAGDKLSISFELFRDSAAAAANVTARFYHNYFTDGQYKTGVRYNASKKDQWEKFEAVYTVPEGVDSVVTGCVRYPTNSNEGIVKVRNILITPISGVVKTTGPTSFGVNGVRTTHIQDNGDFTNPVMSLLKLPRDNKHITSNNFKEFDVD
Physico‐chemical
properties
protein length:379 AA
molecular weight: 42268,88910 Da
isoelectric point:5,21671
aromaticity:0,10290
hydropathy:-0,33668

Domains

Domains [InterPro]
DC_0083
STR
1–379
DC_0083
PS52031
LEC
31–196
PS52031 G3DSA:2.60.120.260
QEG05556.1
1 379
Architecture
STR
STR 1-379
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEG05556.1
1 379
Domain Start End Length (AA) Confidence
N-terminal 1 151 151 0,2567
Central domain 152 368 218 0,5398
C-terminal 369 379 10 0,3849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-151
Central
152-368
C-terminal
369-379

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage JK32
[NCBI] 		2591059 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEG05556.1 [NCBI]
Genbank nucleotide accession
MK962753 [NCBI]
CDS location
range 160732 -> 161871
strand +
CDS
ATGACACAAGAGATAGAATTACGCAACACTGGAATTAAGTTTGCGCATTTCGACGAAGACTCCGCGACATTTACCAGCATTTCAGAAAACAACTCTGTGATGTATAAACTTGAGGTTAGAGGATCTAATGCGGATTCTACCAAACCAGCAAGAATTAGATTTAATGGAGTGGAGATCGTTGGCACTGGCTATGAAAATGGCCTAAATTTTAAAGTTCTTACTCCAACTGGACGACTACACGAAGAAAAGGTATTCTATGGTCGCGGTGCTGTTTTGGCAATGCGTGATTATCTTTCTTTACTGAAAGGTGATTATATCATTGCGATGGCAACGCATGGAGAATTGTTTGCAGATCCGGTAAGTGATGATGTATTCTCTAAGCTGGGATCTGTATCATTCCCGAATCACATTTTGTTACAGCAAATGCCTCGTGTATCCTATGCAGCGATTTATTCTACTAAAATGGGTAAAATTGTGTGCGAAGGGATGCAAGCAACTCACGGGGAAGGACAAGATTCATCTATACAAATTGAGAAAGTCTATGATACTATAGATGATCTTGCTATAACAGGAACACCACAACGATTTTTAGATTATCCGGTTGAGTATGTTAGCGAAGATGCCGAACATTTCGAGCTAATACAATGGCCTCATGATGAGATCAGCGCACCACTTGAAGATTTTAACATAAAGGCAGGTGACAAACTATCAATATCTTTTGAATTGTTCCGTGATAGTGCCGCAGCCGCAGCCAACGTAACAGCGCGTTTCTATCACAACTATTTTACTGACGGACAATATAAAACTGGTGTTCGATACAATGCCAGCAAAAAAGATCAATGGGAAAAGTTTGAAGCAGTCTATACCGTACCGGAAGGAGTTGATAGTGTGGTAACTGGTTGCGTTAGATATCCAACCAACTCCAATGAAGGTATTGTTAAAGTTAGAAACATATTAATAACACCGATCAGTGGAGTTGTCAAAACGACTGGTCCTACTTCCTTTGGTGTTAACGGTGTTAGAACAACTCATATTCAAGATAACGGTGATTTTACTAACCCTGTAATGAGTCTTCTTAAGCTGCCTAGAGACAATAAACATATCACATCCAACAACTTTAAAGAGTTCGATGTTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cee4026afa2c9b1feef9b34acbc27d853f3e5b5365af81af2d594ac2e1b9ca9c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A quest of great importance - developing a broad spectrum Shigella ssp. and Escherichia coli phage collection Kaczorowska,J., Casey,E., Neve,H., Noben,J.-P., Lugli,G.A., Ventura,M., van Sinderen,D. and Mahony,J. 2019-09-26 — GenBank