Protein

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Genbank accession
YP_010739011.1 [GenBank]
Protein name
tail assembly protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MATIVVPQRFAQRRDTTANWNSKDPVLWSGEVGILMDPGQAVKLKVGDGTKKWSELDFFASDGKPVQLRAADGYIQWNYVGDTTWINLVSLDNLRGADGEDGQDGQDGESAYEIAVDGGFVGTVPEWLASLKGEKGDTGDKGDAGNPGTPYARRIQHVADTDAGTFECDWSQYDEIRISLTATVVLSFAGAIDGQGCVLKLRQPPAGGCQVGLPAGVVRYNSLIQAYAVTQAGSRADKVGFVYDGEDARYDLVSIIPGI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 27696,44250 Da
isoelectric point:4,47678
aromaticity:0,08880
hydropathy:-0,28340

Domains

Domains [InterPro]
DC_1473
STR
1–258
DC_1473
SSF69349
STR
9–137
SSF69349
IPR041352
ATT
13–50
IPR041352
YP_010739011.1
1 259
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-50 | STR 51-258 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS-AXL_1
[NCBI] 		2909581 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010739011.1 [NCBI]
Genbank nucleotide accession
NC_073034 [NCBI]
CDS location
range 36987 -> 37766
strand +
CDS
ATGGCAACCATCGTAGTACCACAGCGATTCGCCCAGCGCCGTGACACCACGGCCAACTGGAACAGCAAGGACCCTGTCCTCTGGAGCGGCGAGGTCGGCATCCTCATGGACCCGGGCCAGGCCGTCAAGCTGAAGGTCGGCGACGGCACGAAGAAGTGGAGCGAGCTCGACTTCTTCGCCTCCGACGGCAAGCCGGTGCAGCTGAGGGCCGCGGACGGGTATATCCAGTGGAACTACGTCGGCGACACGACCTGGATCAACCTGGTGTCCCTGGACAACCTCAGGGGCGCGGACGGCGAGGACGGTCAGGATGGCCAGGACGGCGAGAGCGCCTACGAGATAGCCGTCGACGGCGGCTTCGTCGGCACCGTGCCGGAGTGGCTGGCCTCGCTGAAGGGCGAGAAGGGCGACACCGGCGACAAGGGCGACGCCGGCAACCCGGGCACTCCGTACGCCCGGCGCATCCAGCACGTGGCCGACACCGACGCCGGCACCTTCGAGTGCGACTGGAGCCAGTACGACGAGATCCGCATCTCGCTGACCGCCACCGTAGTCCTGAGCTTCGCCGGGGCGATCGACGGGCAGGGCTGCGTGCTGAAGCTGCGCCAGCCGCCAGCCGGCGGGTGCCAGGTCGGGCTGCCCGCCGGGGTGGTACGGTACAACTCCCTGATCCAGGCGTACGCCGTGACCCAGGCCGGGTCCAGGGCGGACAAGGTTGGTTTCGTCTACGACGGCGAAGACGCACGATACGACCTGGTCTCCATCATTCCCGGGATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
31aec76b5cf837c5ded912fba9d8eb135735179f5b0a17bb0f63d7658b99be6c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8807
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Stenotrophomonas maltophilia phage AXL1 as a member of the genus Pamexvirus encoding resistance to trimethoprim-sulfamethoxazole McCutcheon,J.G., Lin,A. and Dennis,J. — — GenBank