Protein

View in Explore
Genbank accession
QBP33011.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MDSAARPAGSTFGSQTVALTANNIPAHTHSVYVTGGGHSHGTSVSISAFDYGTKSSTTFDYGTKTTSNAGAHTHSVSGTAATAGNHTHKVPEGEVNSGGGGIYTSGDDYTPKVAYWSDTQAAGNHTHSVSGTAANAGAHTHTVAIGSHSHTVAIGSHNHNVSVSVTGAGEHSHSGTTGSTGSGQAFNVEQPSFVLYVWQRTA
Physico‐chemical
properties
protein length:202 AA
molecular weight: 20318,32260 Da
isoelectric point:6,49860
aromaticity:0,06931
hydropathy:-0,40545

Domains

Domains [InterPro]
DC_0905
STR
1–202
DC_0905
IPR005003
Unmapped
22–31
IPR005003 IPR051934 IPR005003
IPR005003
Unmapped
67–80
IPR005003 IPR005003 IPR005003 IPR005003
QBP33011.1
1 202
Architecture
STR
STR 1-202
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage CHB7
[NCBI] 		2530182 Uroviricota > Caudoviricetes > Andersonviridae > Mooglevirus > Mooglevirus CHB7
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP33011.1 [NCBI]
Genbank nucleotide accession
MK562504.1 [NCBI]
CDS location
range 37854 -> 38462
strand -
CDS
GTGGACAGTGCAGCTAGACCAGCAGGTTCCACATTTGGTTCCCAAACTGTGGCTTTGACTGCAAACAATATTCCTGCTCACACTCACTCAGTGTATGTTACAGGCGGTGGTCACTCACACGGTACTAGTGTGTCTATCAGCGCATTTGACTATGGTACTAAGTCTTCAACTACCTTTGACTATGGTACAAAGACGACCAGCAATGCTGGTGCTCACACACACTCGGTTAGTGGTACTGCGGCAACTGCTGGTAACCACACTCACAAGGTTCCAGAAGGTGAGGTTAACTCTGGTGGTGGGGGTATCTACACATCTGGTGATGACTACACACCAAAAGTGGCTTACTGGTCTGATACTCAGGCTGCTGGTAACCATACTCACTCAGTGAGTGGTACTGCGGCTAATGCTGGTGCTCATACACATACAGTGGCAATCGGCTCTCACAGTCACACAGTGGCTATTGGTTCACATAATCACAATGTGTCTGTATCTGTCACTGGAGCAGGTGAACATTCCCACTCTGGTACAACAGGGTCAACTGGTTCTGGGCAGGCATTCAACGTTGAACAGCCATCTTTCGTACTGTATGTATGGCAAAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e08fb7cc5122c4b015e4182a833b480597c3f46169b429084f9bdea45fddc7d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6544
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A cornucopia of Shigella phages from the Cornhusker state Doore,S.M., Schrad,J.R., Perrett,H.R., Dover,J.A., Schrad,K.P., Dean,W.F. and Parent,K.N. — — GenBank