Protein

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Genbank accession
QPZ53543.1 [GenBank]
Protein name
putative tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTISSTTVKNSYSGDGSTTTFNYTFKIFADSDLQVIIRSSTATETVKTITTHYTVTGAGSASGGTVVFTSGNIPASGETVVLRRAVPQTQAIDYIANDPFPAESHEEGLDRATMTLQQVQEELDRAIKLSRTNTMTSTEFSVGATDRANKILAFDSSGEISVTQELGTFVGNWSAGTDYNARDLVKDTSTNNIFICTTSHTSSGSQPLTTNTDSAKWSLIVDAASATSSASAAAASATAAASSATAAATSATNAATSETNAATSASTASTQATNAASSATAAATSASNASTSETNAASSATAAASSATSAASSATTATTKASEASTSATNAATSETNAATSATNAATSATNASTSETNAATSASTASTQATNAANSATAAATAQAAAEAAADNFDDTYLGAKASDPTVDNDGDALTAGDLYFNTTSNVLKVYNGSSWQVAAVDATSLASNGFAIAMAIAL
Physico‐chemical
properties
protein length:460 AA
molecular weight: 45652,23640 Da
isoelectric point:4,28767
aromaticity:0,05000
hydropathy:-0,12913

Domains

Domains [InterPro]
DC_0055
ATT
8–135
DC_0055 DC_2093 DC_2093
Coil
Unmapped
102–129
Coil DC_2093
QPZ53543.1
1 460
Architecture
ATT
STR
STR
ATT 8-135 | STR 149-283 | STR 303-459 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC035P
[NCBI] 		2796521 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53543.1 [NCBI]
Genbank nucleotide accession
MW273923 [NCBI]
CDS location
range 17353 -> 18735
strand -
CDS
ATGACAATATCATCGACTACAGTAAAAAATTCATATTCTGGTGATGGTTCTACTACCACCTTTAATTATACATTTAAGATTTTTGCGGACTCTGATTTACAGGTCATTATAAGATCATCAACAGCAACTGAAACTGTTAAAACAATTACTACACATTATACAGTAACTGGTGCAGGATCTGCTTCTGGTGGAACTGTAGTATTTACTTCTGGTAATATTCCAGCAAGTGGTGAAACAGTTGTGTTGAGAAGAGCAGTTCCGCAAACACAGGCAATAGATTATATTGCTAATGATCCTTTCCCTGCGGAATCACATGAAGAGGGATTGGATCGTGCAACTATGACTCTTCAACAAGTACAAGAAGAGTTAGATAGAGCGATCAAATTATCAAGAACAAATACAATGACATCTACAGAATTTTCTGTAGGTGCAACAGATAGAGCAAATAAAATTTTAGCATTTGATTCTTCTGGAGAAATTTCAGTAACACAAGAACTAGGAACATTTGTTGGAAACTGGTCTGCTGGTACAGATTATAATGCTAGAGATTTAGTAAAAGATACTTCAACAAATAATATTTTTATATGTACAACATCACACACATCATCTGGATCACAACCTTTAACAACAAATACTGATTCAGCTAAATGGTCTTTAATAGTTGATGCTGCTAGTGCAACGTCATCTGCTAGTGCTGCTGCTGCTAGTGCTACTGCCGCAGCTAGTAGTGCAACTGCTGCCGCTACATCAGCAACCAATGCTGCAACAAGTGAAACCAATGCTGCCACATCAGCATCTACTGCATCAACTCAAGCAACTAACGCAGCTAGTTCTGCAACTGCCGCTGCTACATCAGCATCTAACGCTTCGACTTCAGAAACAAACGCTGCATCATCTGCAACCGCTGCTGCGAGTTCAGCTACTTCTGCCGCTAGTTCTGCTACAACTGCAACAACGAAAGCGAGTGAAGCATCAACATCAGCTACTAACGCTGCAACGTCTGAAACGAATGCCGCAACGTCTGCTACCAACGCAGCAACATCGGCTACCAATGCTAGTACATCAGAGACTAATGCAGCTACTTCAGCATCAACTGCTAGCACACAAGCGACTAATGCTGCCAACTCAGCTACTGCTGCCGCAACAGCTCAAGCCGCTGCCGAAGCCGCAGCTGATAATTTTGATGATACTTATTTGGGTGCGAAAGCTAGTGATCCTACAGTAGATAATGATGGGGATGCACTAACTGCAGGAGATTTATATTTCAATACAACATCAAATGTATTAAAGGTTTATAATGGTTCATCTTGGCAGGTAGCTGCTGTAGATGCCACAAGTTTAGCATCAAATGGATTTGCGATTGCAATGGCGATTGCATTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a4a217462533b3c63136ead54b037fd647ed7e543f1db86a0af4c52ccca54c63
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank